Gene NCBI:23790 | MetamORF

Gene

ID CARD

NCBI:23790

Aliases

AL022675
AW455561, AW548837, Coro1c
CRN2, ENSMUSG00000004530, MGI:1345964
NCBI:23790, OFF:Coro1c

Chromosome

Transcripts

89 ORFs
10 known transcripts
138 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

62812

ENSMUST00000164980

Coro1c-205

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1234401	84	ATC ...	IPI ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1238557	138	AGG ...	RDL ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
173738	69	GTG ...	VSP ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	InCDS NMD Overlapping sORF	BMDC, E14, Spleen_B_cell, v6-5
64725	96	GTG ...	VLD ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, E14, Neutrophil, NSC
1685838	48	ATG ...	MAG ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse Johnstone2016	Alternative Downstream NMD sORF	Glioma, Liver, MEF, MESC
1686547	39	ATG ...	MTH ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
1237974	144	AAG ...	KNR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1236479	48	AGG ...	RSG ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1238449	117	AAG ...	KNI ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
569422	39	GTG ...	VPP ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC, E14, MEF, NSC, v6-5
184508	81	ATG ...	MTT ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	InCDS NMD Overlapping sORF	BMDC, Brain, E14, Spleen_B_cell, v6-5
1890	36	TTG ...	LPA ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, Brain, E14, MEF, NSC, Spleen_B_cell, v6-5
180191	84	CTG ...	LER ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, MEF, Spleen_B_cell
181843	39	CTG ...	LHR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Spleen_B_cell
1239763	75	ATA ...	IKE ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Downstream NMD sORF	E14
830304	66	TTG ...	LEA ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative NMD sORF Upstream	BMDC, E14, Neutrophil
172345	36	GTG ...	VPS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain
566758	63	ATG ...	MGC ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC, E14, MEF
1885	30	CTG ...	LHC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	E14, NSC
66213	93	CTG ...	LKE ...	Ribo-seq	CTG	moderate	7	sORFs_org_Mouse	Downstream NMD sORF	BMDC, Brain, E14, MEF, NSC, Spleen_B_cell, Testis
65070	255	CTG ...	LYP ...	Ribo-seq	CTG		11	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, Spleen_B_cell, Testis, v6-5
1234996	87	AGG ...	RRK ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
62943	126	GTG ...	VVK ...	Ribo-seq	GTG		10	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC, Brain, E14, MEF, Neutrophil, NSC, Spleen_B_cell, Testis, v6-5
560286	78	GTG ...	VIM ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, MEF
518784	30	ATG ...	MRE ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC, E14, Spleen_B_cell, v6-5
64036	33	TTG ...	LTP ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, MEF
1310521	42	TTG ...	LFL ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC, E14, MEF, NSC
1236108	120	ACG ...	TDE ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Downstream NMD sORF	E14
63509	108	CTG ...	LDS ...	Ribo-seq	CTG		12	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, Spleen_B_cell, Testis, v6-5
517795	84	CTG ...	LTR ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, Spleen_B_cell
1237967	36	AGG ...	RGR ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
569621	72	ATG ...	MPL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, MEF
1238798	96	ATT ...	ILK ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	Downstream NMD sORF	E14
1238729	243	ACG ...	TAG ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
190324	84	ATG ...	MTR ...	Ribo-seq	ATG		1	Johnstone2016	Alternative InCDS NMD Overlapping sORF	Glioma, Liver, MEF, MESC
1235488	30	ATC ...	IQR ...	Ribo-seq	ATC		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	E14
1234642	99	AAG ...	KPA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1311063	132	TTG ...	LAD ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	BMDC
1236061	54	AGG ...	RPR ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1236742	84	AAG ...	KKS ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1235835	57	ATT ...	IQQ ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1019628	255	GTG ...	VRQ ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
520212	90	TTG ...	LLS ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative Downstream NMD Overlapping sORF	BMDC, E14, MEF, Spleen_B_cell, v6-5
2201	81	ATG ...	MKW ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative Downstream NMD Overlapping sORF	BMDC, E14, MEF, Spleen_B_cell, v6-5
1236268	243	AGG ...	RQE ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Downstream NMD sORF	E14
64914	168	TTG ...	LKH ...	Ribo-seq	TTG		10	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC, Brain, E14, MEF, Neutrophil, NSC, Spleen_B_cell, Testis, v6-5
169309	93	ATG ...	MTS ...	Ribo-seq	ATG	moderate	7	sORFs_org_Mouse Johnstone2016	InCDS NMD Overlapping sORF	BMDC, Brain, E14, Glioma, Liver, MEF, MESC, Spleen_B_cell, v6-5
2341	93	CTG ...	LDI ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, MEF, Neutrophil, NSC, Spleen_B_cell
560196	66	CTG ...	LQT ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC, E14, MEF, NSC, v6-5
1512051	51	TTG ...	LFC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	NSC
1238157	255	AGG ...	RLR ...	Ribo-seq	AGG		1	sORFs_org_Mouse	NMD sORF Upstream	E14
1238228	240	TTG ...	LQQ ...	Ribo-seq	TTG		1	sORFs_org_Mouse	NMD sORF Upstream	E14
1239897	57	AAG ...	KKP ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
521740	42	GTG ...	VGE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Spleen_B_cell
571097	267	ATG ...	MKW ...	Ribo-seq	ATG		1	Johnstone2016	Alternative Downstream NMD Overlapping sORF	Glioma, Liver, MEF, MESC
62811	105	TTG ...	LDE ...	Ribo-seq	TTG	strong	8	sORFs_org_Mouse	Downstream NMD sORF	BMDC, Brain, E14, MEF, NSC, Spleen_B_cell, Testis
179969	48	ATG ...	MTR ...	Ribo-seq	ATG		8	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, Brain, E14, MEF, Neutrophil, NSC, v6-5
1311749	33	TTG ...	LEQ ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Downstream NMD sORF	E14, NSC
1235729	138	ATC ...	IRY ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Downstream NMD sORF	E14
1240637	195	AAG ...	KNA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1237585	153	ATT ...	IPG ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1019197	117	GTG ...	VCG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Neutrophil
1235770	129	AAG ...	KVV ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1237589	42	ACG ...	TIR ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14

1018527

ENSMUST00000171630

Coro1c-210

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1512897	105	CTG ...	LGQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
1558995	84	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
521740	42	GTG ...	VGE ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
173738	69	GTG ...	VSP ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
1019628	255	GTG ...	VRQ ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain
1239278	90	TTG ...	LCR ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
184508	81	ATG ...	MTT ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
1018526	258	GTG ...	VVR ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain
169309	93	ATG ...	MTS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
1018845	216	GTG ...	VKN ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain

1886

ENSMUST00000166647

Coro1c-206

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
64725	96	GTG ...	VLD ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	R1E, Testis
179969	48	ATG ...	MTR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	ncRNA sORF	B_cell, R1E
2341	93	CTG ...	LDI ...	Ribo-seq	CTG		5	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, R1E, Skin_tumor, Testis
1890	36	TTG ...	LPA ...	Ribo-seq	TTG		3	sORFs_org_Mouse	ncRNA sORF	B_cell, R1E, Skin_tumor
181843	39	CTG ...	LHR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	ncRNA sORF	R1E
1019197	117	GTG ...	VCG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
1885	30	CTG ...	LHC ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	MEF, Skin_tumor
64036	33	TTG ...	LTP ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	B_cell, Testis

3036771

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
169309	93	ATG ...	MTS ...	Predicted	ATG		1	Samandi2017	sORF
571097	267	ATG ...	MKW ...	Predicted	ATG		1	Samandi2017	sORF
1241662	99	ATG ...	MCF ...	Predicted	ATG		1	Samandi2017	sORF

2571

ENSMUST00000004646

Coro1c-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
520212	90	TTG ...	LLS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
1242423	228	ACG ...	TIR ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
573891	249	ATG ...	MGC ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, NSC, v6-5
560286	78	GTG ...	VIM ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF
185818	93	CTG ...	LQT ...	Ribo-seq	CTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, NSC, R1E
2201	81	ATG ...	MKW ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
569422	39	GTG ...	VPP ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain
190324	84	ATG ...	MTR ...	Ribo-seq	ATG		14	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, NSC, R1E, Spleen_B_cell, v6-5
181843	39	CTG ...	LHR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
572720	72	TTG ...	LTS ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, NSC, v6-5
67086	66	GTG ...	VPP ...	Ribo-seq	GTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, NSC, Testis
834657	63	TTG ...	LEA ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Neutrophil
1890	36	TTG ...	LPA ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, MEF
830304	66	TTG ...	LEA ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell
1242496	114	AGG ...	RSL ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
571097	267	ATG ...	MKW ...	Ribo-seq	ATG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, NSC, v6-5
560196	66	CTG ...	LQT ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain
524830	63	CTG ...	LTR ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell, BMDC, Brain, NSC, Spleen_B_cell
64036	33	TTG ...	LTP ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF
572975	276	TTG ...	LLS ...	Ribo-seq	TTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, NSC, v6-5
1469120	87	GTG ...	VQA ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, NSC
2570	72	TTG ...	LPA ...	Ribo-seq	TTG		15	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, NSC, R1E, Skin_tumor, Spleen_B_cell, v6-5
569621	72	ATG ...	MPL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
169309	93	ATG ...	MTS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
180191	84	CTG ...	LER ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
179969	48	ATG ...	MTR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
566758	63	ATG ...	MGC ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
571444	51	TTG ...	LPD ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, NSC
1241662	99	ATG ...	MCF ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14, MEF, NSC
573080	57	GTG ...	VKL ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, NSC
1241269	69	ACG ...	TST ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
833927	87	GTG ...	VPG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell

1557791

ENSMUST00000163995

Coro1c-204

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
520212	90	TTG ...	LLS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Brain
2201	81	ATG ...	MKW ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	Brain
566758	63	ATG ...	MGC ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	Brain

173739

ENSMUST00000163264

Coro1c-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
169309	93	ATG ...	MTS ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	sORF	3T3, BMDC, E14, MEF, NSC
173738	69	GTG ...	VSP ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	sORF	3T3, Brain, MEF, R1E
184508	81	ATG ...	MTT ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	sORF	3T3, BMDC, MEF, NSC, R1E
172345	36	GTG ...	VPS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	sORF	3T3, R1E
1238511	39	AGG ...	RGL ...	Ribo-seq	AGG		1	sORFs_org_Mouse	sORF	E14
1239278	90	TTG ...	LCR ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	E14, NSC
1512897	105	CTG ...	LGQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	MEF, NSC
521740	42	GTG ...	VGE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	NSC

977557

ENSMUST00000111283

Coro1c-202

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
520212	90	TTG ...	LLS ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Intronic sORF	NSC, R1E
566758	63	ATG ...	MGC ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Intronic sORF	NSC
2201	81	ATG ...	MKW ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	NSC, R1E
1512559	54	GTG ...	VPS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	NSC
977556	168	ATT ...	IAL ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF

168367

ENSMUST00000168493

Coro1c-208

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1558300	42	CTG ...	LAP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
1311063	132	TTG ...	LAD ...	Ribo-seq	TTG		4	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, NSC
560286	78	GTG ...	VIM ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	MEF
64036	33	TTG ...	LTP ...	Ribo-seq	TTG		3	sORFs_org_Mouse	ncRNA sORF	Brain, E14, v6-5
181843	39	CTG ...	LHR ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	ncRNA sORF	Brain, E14, v6-5
180191	84	CTG ...	LER ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	MEF, NSC

2202

ENSMUST00000168634

Coro1c-209

retained_intron

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

2201

ATG ...

MKW ...

Ribo-seq

ATG

sORFs_org_Mouse

Skin_tumor

832708

ENSMUST00000168399

Coro1c-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
521740	42	GTG ...	VGE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	B_cell

ORFs

89 ORFs
10 known transcripts
138 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

1234401

ATC...

IPI...

ATC

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

1512897

105

CTG...

LGQ...

CTG

Intronic
sORF

Brain, MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018527	ENSMUST00000171630	Coro1c-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
173739	ENSMUST00000163264	Coro1c-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

64725

GTG...

VLD...

GTG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping

R1E, Testis, Brain,
E14, Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1886	ENSMUST00000166647	Coro1c-206	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

169309

ATG...

MTS...

ATG

sORF
InCDS
NMD
Overlapping
Intronic

3T3, BMDC,
E14, MEF, NSC,
Brain, Glioma, Liver,
MESC, Spleen_B_cell, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
3036771	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
173739	ENSMUST00000163264	Coro1c-203	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	moderate	7	sORFs_org_Mouse Johnstone2016
1018527	ENSMUST00000171630	Coro1c-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1238557

138

AGG...

RDL...

AGG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

173738

GTG...

VSP...

GTG

InCDS
NMD
Overlapping
sORF
Intronic

BMDC, E14, Spleen_B_cell,
v6-5, 3T3, Brain,
MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse
173739	ENSMUST00000163264	Coro1c-203	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
1018527	ENSMUST00000171630	Coro1c-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

520212

TTG...

LLS...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic
Downstream
NMD

3T3, Brain, NSC,
R1E, BMDC, E14,
MEF, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1557791	ENSMUST00000163995	Coro1c-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
977557	ENSMUST00000111283	Coro1c-202	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse

1242423

228

ACG...

TIR...

ACG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

573891

249

ATG...

MGC...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
E14, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

560286

GTG...

VIM...

GTG

Alternative
InCDS
Overlapping
sORF
ncRNA
NMD

3T3, MEF, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
168367	ENSMUST00000168493	Coro1c-208	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

179969

ATG...

MTR...

ATG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping

B_cell, R1E, BMDC,
Brain, E14, MEF,
Neutrophil, NSC, v6-5,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1886	ENSMUST00000166647	Coro1c-206	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		8	sORFs_org_Mouse
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1558995

CTG...

LLS...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018527	ENSMUST00000171630	Coro1c-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

185818

CTG...

LQT...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		10	sORFs_org_Mouse

1558300

CTG...

LAP...

CTG

ncRNA
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
168367	ENSMUST00000168493	Coro1c-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

2341

CTG...

LDI...

CTG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping

B_cell, Brain, R1E,
Skin_tumor, Testis, E14,
MEF, Neutrophil, NSC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1886	ENSMUST00000166647	Coro1c-206	processed_transcript	Ribo-seq		5	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse

2201

ATG...

MKW...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic
Downstream
NMD

3T3, NSC, R1E,
Skin_tumor, Brain, BMDC,
E14, MEF, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
977557	ENSMUST00000111283	Coro1c-202	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
2202	ENSMUST00000168634	Coro1c-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
1557791	ENSMUST00000163995	Coro1c-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse

566758

ATG...

MGC...

ATG

Intronic
sORF
Alternative
Downstream
NMD
InCDS
Overlapping

NSC, BMDC, E14,
MEF, Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
977557	ENSMUST00000111283	Coro1c-202	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
1557791	ENSMUST00000163995	Coro1c-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1685838

ATG...

MAG...

ATG

Alternative
Downstream
NMD
sORF

Glioma, Liver, MEF,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse Johnstone2016

1686547

ATG...

MTH...

ATG

Alternative
Downstream
NMD
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1311063

132

TTG...

LAD...

TTG

ncRNA
sORF
InCDS
NMD
Overlapping

Brain, E14, MEF,
NSC, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
168367	ENSMUST00000168493	Coro1c-208	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

571097

267

ATG...

MKW...

ATG

sORF
Alternative
InCDS
Overlapping
Downstream
NMD

3T3, BMDC,
Brain, E14, MEF,
NSC, v6-5, Glioma,
Liver, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
3036771	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	Johnstone2016

1237974

144

AAG...

KNR...

AAG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

569422

GTG...

VPP...

GTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

3T3, B_cell, Brain,
BMDC, E14, MEF,
NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse

1236479

AGG...

RSG...

AGG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

184508

ATG...

MTT...

ATG

sORF
InCDS
NMD
Overlapping
Intronic

3T3, BMDC, MEF,
NSC, R1E, Brain,
E14, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
173739	ENSMUST00000163264	Coro1c-203	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	moderate	5	sORFs_org_Mouse
1018527	ENSMUST00000171630	Coro1c-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1238449

117

AAG...

KNI...

AAG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

190324

ATG...

MTR...

ATG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC, R1E, Spleen_B_cell,
v6-5, Glioma, Liver,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		14	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	Johnstone2016

1890

TTG...

LPA...

TTG

Alternative
InCDS
NMD
Overlapping
sORF
ncRNA

BMDC, Brain, E14,
MEF, NSC, Spleen_B_cell,
v6-5, 3T3, B_cell,
R1E, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		7	sORFs_org_Mouse
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
1886	ENSMUST00000166647	Coro1c-206	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

180191

CTG...

LER...

CTG

InCDS
NMD
Overlapping
sORF
ncRNA

Brain, MEF, Spleen_B_cell,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
168367	ENSMUST00000168493	Coro1c-208	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

181843

CTG...

LHR...

CTG

InCDS
Overlapping
sORF
NMD
ncRNA

3T3, Spleen_B_cell, R1E,
Brain, E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1886	ENSMUST00000166647	Coro1c-206	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
168367	ENSMUST00000168493	Coro1c-208	processed_transcript	Ribo-seq	weak	3	sORFs_org_Mouse

572720

TTG...

LTS...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse

67086

GTG...

VPP...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		9	sORFs_org_Mouse

834657

TTG...

LEA...

TTG

Alternative
sORF
Upstream

B_cell, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1239763

ATA...

IKE...

ATA

Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

830304

TTG...

LEA...

TTG

Alternative
NMD
sORF
Upstream

BMDC, E14, Neutrophil,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

521740

GTG...

VGE...

GTG

Intronic
sORF
InCDS
NMD
Overlapping

Brain, B_cell, Spleen_B_cell,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018527	ENSMUST00000171630	Coro1c-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
832708	ENSMUST00000168399	Coro1c-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
173739	ENSMUST00000163264	Coro1c-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

172345

GTG...

VPS...

GTG

InCDS
NMD
Overlapping
sORF

Brain, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
173739	ENSMUST00000163264	Coro1c-203	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

1512559

GTG...

VPS...

GTG

Intronic
sORF

NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
977557	ENSMUST00000111283	Coro1c-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

1242496

114

AGG...

RSL...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1885

CTG...

LHC...

CTG

InCDS
NMD
Overlapping
sORF
ncRNA

E14, NSC, MEF,
Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
1886	ENSMUST00000166647	Coro1c-206	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

66213

CTG...

LKE...

CTG

Downstream
NMD
sORF

BMDC, Brain, E14,
MEF, NSC, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	moderate	7	sORFs_org_Mouse

560196

CTG...

LQT...

CTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

3T3, B_cell, Brain,
BMDC, E14, MEF,
NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse

65070

255

CTG...

LYP...

CTG

Alternative
Downstream
NMD
sORF

BMDC, Brain, E14,
Liver, MEF, Neutrophil,
NSC, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		11	sORFs_org_Mouse

977556

168

ATT...

IAL...

ATT

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
977557	ENSMUST00000111283	Coro1c-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1234996

AGG...

RRK...

AGG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

62943

126

GTG...

VVK...

GTG

Alternative
Downstream
NMD
sORF

BMDC, Brain, E14,
MEF, Neutrophil, NSC,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		10	sORFs_org_Mouse

518784

ATG...

MRE...

ATG

Alternative
Downstream
NMD
sORF

BMDC, E14, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	weak	5	sORFs_org_Mouse

64036

TTG...

LTP...

TTG

Alternative
InCDS
NMD
Overlapping
sORF
ncRNA

BMDC, MEF, 3T3,
Brain, E14, v6-5,
B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
168367	ENSMUST00000168493	Coro1c-208	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
1886	ENSMUST00000166647	Coro1c-206	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

1310521

TTG...

LFL...

TTG

Alternative
Downstream
NMD
sORF

BMDC, E14, MEF,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

1236108

120

ACG...

TDE...

ACG

Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

524830

CTG...

LTR...

CTG

Overlapping
sORF
Upstream

B_cell, BMDC, Brain,
NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse

63509

108

CTG...

LDS...

CTG

Alternative
Downstream
NMD
sORF

BMDC, Brain, E14,
Liver, MEF, Neutrophil,
NSC, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		12	sORFs_org_Mouse

1019628

255

GTG...

VRQ...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Brain, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018527	ENSMUST00000171630	Coro1c-210	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

517795

CTG...

LTR...

CTG

Alternative
Downstream
NMD
sORF

E14, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	moderate	3	sORFs_org_Mouse

1237967

AGG...

RGR...

AGG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1241662

ATG...

MCF...

ATG

sORF
Alternative
InCDS
Overlapping

BMDC, E14,
MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
3036771	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

569621

ATG...

MPL...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1238798

ATT...

ILK...

ATT

Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1238729

243

ACG...

TAG...

ACG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1019197

117

GTG...

VCG...

GTG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping

Brain, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1886	ENSMUST00000166647	Coro1c-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1235488

ATC...

IQR...

ATC

InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1234642

AAG...

KPA...

AAG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1236061

AGG...

RPR...

AGG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

1236742

AAG...

KKS...

AAG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1235835

ATT...

IQQ...

ATT

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

1238511

AGG...

RGL...

AGG

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
173739	ENSMUST00000163264	Coro1c-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1239278

TTG...

LCR...

TTG

Intronic
sORF

Brain, E14, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018527	ENSMUST00000171630	Coro1c-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
173739	ENSMUST00000163264	Coro1c-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

572975

276

TTG...

LLS...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
E14, MEF, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse

1236268

243

AGG...

RQE...

AGG

Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

64914

168

TTG...

LKH...

TTG

Alternative
Downstream
NMD
sORF

BMDC, Brain, E14,
MEF, Neutrophil, NSC,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		10	sORFs_org_Mouse

1018526

258

GTG...

VVR...

GTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018527	ENSMUST00000171630	Coro1c-210	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

1469120

GTG...

VQA...

GTG

Alternative
InCDS
Overlapping
sORF

BMDC, MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

1512051

TTG...

LFC...

TTG

Alternative
Downstream
NMD
sORF

NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1238157

255

AGG...

RLR...

AGG

NMD
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1238228

240

TTG...

LQQ...

TTG

NMD
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1239897

AAG...

KKP...

AAG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

2570

TTG...

LPA...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC, R1E, Skin_tumor,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		15	sORFs_org_Mouse

62811

105

TTG...

LDE...

TTG

Downstream
NMD
sORF

BMDC, Brain, E14,
MEF, NSC, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	strong	8	sORFs_org_Mouse

1311749

TTG...

LEQ...

TTG

Downstream
NMD
sORF

E14, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse

1235729

138

ATC...

IRY...

ATC

Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1240637

195

AAG...

KNA...

AAG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1237585

153

ATT...

IPG...

ATT

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1018845

216

GTG...

VKN...

GTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018527	ENSMUST00000171630	Coro1c-210	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

1235770

129

AAG...

KVV...

AAG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

571444

TTG...

LPD...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

1237589

ACG...

TIR...

ACG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62812	ENSMUST00000164980	Coro1c-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

573080

GTG...

VKL...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

1241269

ACG...

TST...

ACG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

833927

GTG...

VPG...

GTG

Alternative
sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2571	ENSMUST00000004646	Coro1c-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

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