Gene NCBI:231915 | MetamORF

Gene

ID CARD

NCBI:231915

Aliases

E430026A01Rik
ENSMUSG00000041264, MGI:2442342, NCBI:231915
OFF:Uspl1, Uspl1

Chromosome

Transcripts

64 ORFs
11 known transcripts
169 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

189594

ENSMUST00000119685

Uspl1-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1805510	132	TTG ...	LNV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative sORF Upstream	R1E
64100	174	CTG ...	LWS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
61537	237	ATG ...	MTS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
1241169	81	ATG ...	MVG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF Upstream	R1E
63452	141	ATG ...	MWL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
64851	135	TTG ...	LWP ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
62958	162	GTG ...	VRL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
63354	36	CTG ...	LYA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF Upstream	R1E
65502	240	GTG ...	VMT ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
62313	264	ATG ...	MVN ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
189593	105	TTG ...	LEM ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, E14, NSC, R1E, v6-5
63764	180	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
1806064	78	GTG ...	VGT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF Upstream	R1E
1801202	42	TTG ...	LEM ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
1238634	36	ATG ...	MVC ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
62013	102	GTG ...	VSH ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
190119	99	ATG ...	MVC ...	Ribo-seq	ATG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, E14, MEF, NSC, R1E, v6-5
65156	39	GTG ...	VSS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
65052	72	GTG ...	VGT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF Upstream	R1E
63321	192	CTG ...	LPA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
65393	144	ATG ...	MMW ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
1242574	72	ATG ...	MRR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative sORF Upstream	R1E
62584	63	ATG ...	MLQ ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
1804198	138	CTG ...	LIQ ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
61480	252	ATG ...	MEK ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
66017	75	ATG ...	MVG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF Upstream	R1E
61660	207	GTG ...	VLT ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
61427	93	CTG ...	LSW ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
1806374	42	CTG ...	LYA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF Upstream	R1E
64242	114	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
66335	147	CTG ...	LMM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
523825	75	CTG ...	LEE ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative sORF Upstream	3T3, R1E

61428

ENSMUST00000121416

Uspl1-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
63321	192	CTG ...	LPA ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
62313	264	ATG ...	MVN ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
64242	114	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
65052	72	GTG ...	VGT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, Testis
66888	135	GTG ...	VGT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, Testis
65156	39	GTG ...	VSS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Testis
61660	207	GTG ...	VLT ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
62013	102	GTG ...	VSH ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
63354	36	CTG ...	LYA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative sORF Upstream	Brain, Liver, Testis
63452	141	ATG ...	MWL ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
62958	162	GTG ...	VRL ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
65502	240	GTG ...	VMT ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
61480	252	ATG ...	MEK ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
61537	237	ATG ...	MTS ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
64100	174	CTG ...	LWS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
64851	135	TTG ...	LWP ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
66621	138	ATG ...	MVG ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, Testis
66404	99	CTG ...	LYA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative sORF Upstream	Brain, Liver, Testis
62584	63	ATG ...	MLQ ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	Brain
66017	75	ATG ...	MVG ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, Testis
63764	180	CTG ...	LLL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
65393	144	ATG ...	MMW ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
61427	93	CTG ...	LSW ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis
66335	147	CTG ...	LMM ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Testis

1018574

ENSMUST00000150921

Uspl1-210

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
61427	93	CTG ...	LSW ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Liver
64100	174	CTG ...	LWS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
61537	237	ATG ...	MTS ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, E14
64242	114	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Liver
65393	144	ATG ...	MMW ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
63321	192	CTG ...	LPA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
66335	147	CTG ...	LMM ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
64851	135	TTG ...	LWP ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
63764	180	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
63452	141	ATG ...	MWL ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
65156	39	GTG ...	VSS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
62013	102	GTG ...	VSH ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Liver
1236369	162	ATG ...	MFT ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
62958	162	GTG ...	VRL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
1238111	246	AAG ...	KCV ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
62313	264	ATG ...	MVN ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Intronic sORF	Brain, E14, Liver
65502	240	GTG ...	VMT ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	Brain, E14
61480	252	ATG ...	MEK ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse	Intronic sORF	Brain, E14, Liver
61660	207	GTG ...	VLT ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain

516900

ENSMUST00000117878

Uspl1-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
66017	75	ATG ...	MVG ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Spleen_B_cell
64242	114	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
63321	192	CTG ...	LPA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
63452	141	ATG ...	MWL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
62584	63	ATG ...	MLQ ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell
61537	237	ATG ...	MTS ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	B_cell, Spleen_B_cell
1236369	162	ATG ...	MFT ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
63764	180	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
62958	162	GTG ...	VRL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
61660	207	GTG ...	VLT ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
65052	72	GTG ...	VGT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Spleen_B_cell
829447	120	TTG ...	LNV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell
66888	135	GTG ...	VGT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Spleen_B_cell
66404	99	CTG ...	LYA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Spleen_B_cell
61480	252	ATG ...	MEK ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	B_cell, Spleen_B_cell
62313	264	ATG ...	MVN ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative Overlapping sORF Upstream	Glioma, Liver, MEF, MESC, Spleen_B_cell
833222	30	GTG ...	VDT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
65156	39	GTG ...	VSS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
66621	138	ATG ...	MVG ...	Ribo-seq	ATG		3	sORFs_org_Mouse Johnstone2016	Alternative sORF Upstream	B_cell, Glioma, Liver, MEF, MESC, Spleen_B_cell
65393	144	ATG ...	MMW ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
63354	36	CTG ...	LYA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Spleen_B_cell
62013	102	GTG ...	VSH ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
61427	93	CTG ...	LSW ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
66335	147	CTG ...	LMM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
64851	135	TTG ...	LWP ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
64100	174	CTG ...	LWS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
65502	240	GTG ...	VMT ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell

414699

ENSMUST00000139474

Uspl1-208

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
63354	36	CTG ...	LYA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	sORF	3T3, MEF, v6-5
66621	138	ATG ...	MVG ...	Ribo-seq	ATG		4	sORFs_org_Mouse	sORF	3T3, E14, MEF, v6-5
66404	99	CTG ...	LYA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	3T3, E14
66017	75	ATG ...	MVG ...	Ribo-seq	ATG		3	sORFs_org_Mouse	sORF	3T3, MEF, v6-5
61537	237	ATG ...	MTS ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5
66888	135	GTG ...	VGT ...	Ribo-seq	GTG		4	sORFs_org_Mouse	sORF	3T3, E14, MEF, v6-5
65052	72	GTG ...	VGT ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF	3T3, MEF, v6-5
64100	174	CTG ...	LWS ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5
62313	264	ATG ...	MVN ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5
64851	135	TTG ...	LWP ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5
65502	240	GTG ...	VMT ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5
65393	144	ATG ...	MMW ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5
62584	63	ATG ...	MLQ ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	sORF	3T3, Brain, C2C12, E14
66335	147	CTG ...	LMM ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5
63321	192	CTG ...	LPA ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5
61480	252	ATG ...	MEK ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5
63452	141	ATG ...	MWL ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5
414698	51	AGG ...	RSS ...	Ribo-seq	AGG		1	sORFs_org_Mouse	sORF	C2C12
414984	114	AGG ...	RSS ...	Ribo-seq	AGG		1	sORFs_org_Mouse	sORF	C2C12
62958	162	GTG ...	VRL ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5
63764	180	CTG ...	LLL ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5
62013	102	GTG ...	VSH ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	sORF	3T3, E14
64242	114	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	sORF	3T3, E14
61660	207	GTG ...	VLT ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	sORF	3T3, E14, v6-5

523826

ENSMUST00000050472

Uspl1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
834083	165	CTG ...	LWG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	E14
831138	174	TTG ...	LLS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative sORF Upstream	E14
1241583	186	TTG ...	LLS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative sORF Upstream	E14
1242541	60	AAG ...	KRS ...	Ribo-seq	AAG		1	sORFs_org_Mouse	sORF Upstream	E14
1241169	81	ATG ...	MVG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF Upstream	E14
833731	243	CTG ...	LPQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell
1237060	54	AAG ...	KRS ...	Ribo-seq	AAG		1	sORFs_org_Mouse	sORF Upstream	E14
903213	132	CTG ...	LEE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	E14
829940	153	CTG ...	LWG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	E14
1238382	63	CTG ...	LAE ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF Upstream	E14
1237007	60	ATG ...	MRR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative sORF Upstream	E14
66017	75	ATG ...	MVG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF Upstream	E14
1242574	72	ATG ...	MRR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative sORF Upstream	E14
523825	75	CTG ...	LEE ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative sORF Upstream	E14, Spleen_B_cell

1085271

ENSMUST00000126168

Uspl1-207

nonsense_mediated_decay

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

1085270

CTG ...

LNS ...

Ribo-seq

CTG

moderate

sORFs_org_Mouse

v6-5

1663331

CTG ...

LYK ...

Ribo-seq

CTG

weak

sORFs_org_Mouse

MEF

831139

ENSMUST00000122160

Uspl1-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1064137	78	GTG ...	VGT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF Upstream	MEF, Neutrophil
1063992	81	ATG ...	MVG ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF Upstream	MEF, Neutrophil
1090964	102	CTG ...	LEE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	v6-5
66017	75	ATG ...	MVG ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF Upstream	MEF, Neutrophil
63354	36	CTG ...	LYA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF Upstream	MEF, Neutrophil
1090104	54	ATG ...	MAP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative sORF Upstream	v6-5
1787293	42	CTG ...	LYA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF Upstream	MEF
1090722	42	GTG ...	VQT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	v6-5
65052	72	GTG ...	VGT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF Upstream	MEF, Neutrophil
62584	63	ATG ...	MLQ ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC
833284	222	TTG ...	LLS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell
831138	174	TTG ...	LLS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell

521217

ENSMUST00000149896

Uspl1-209

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1805753	264	TTG ...	LGK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	R1E
62584	63	ATG ...	MLQ ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	ncRNA sORF	BMDC, E14, Spleen_B_cell
1235847	51	AAG ...	KSQ ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	ncRNA sORF	E14
62313	264	ATG ...	MVN ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
61480	252	ATG ...	MEK ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
902893	30	CTG ...	LSF ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, E14
1238634	36	ATG ...	MVC ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	ncRNA sORF	E14
1805923	273	CTG ...	LGY ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	R1E

62585

ENSMUST00000200759

Uspl1-211

retained_intron

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

ORF annotations

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

62584

ATG ...

MLQ ...

Ribo-seq

ATG

moderate

sORFs_org_Mouse

Testis

829941

ENSMUST00000100410

Uspl1-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
903213	132	CTG ...	LEE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	BMDC
523825	75	CTG ...	LEE ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, BMDC
829940	153	CTG ...	LWG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell
834083	165	CTG ...	LWG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell
65052	72	GTG ...	VGT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF Upstream	MEF
66017	75	ATG ...	MVG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF Upstream	MEF

3052427

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
190119	99	ATG ...	MVC ...	Predicted	ATG		1	Samandi2017	sORF
62313	264	ATG ...	MVN ...	Predicted	ATG		1	Samandi2017	sORF
1236369	162	ATG ...	MFT ...	Predicted	ATG		1	Samandi2017	sORF
66621	138	ATG ...	MVG ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

64 ORFs
11 known transcripts
169 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

1805510

132

TTG...

LNV...

TTG

Alternative
sORF
Upstream

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

63321

192

CTG...

LPA...

CTG

Alternative
Overlapping
sORF
Upstream
Intronic
InCDS

Brain, Testis, Spleen_B_cell,
3T3, E14, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

61427

CTG...

LSW...

CTG

Intronic
sORF
Alternative
Overlapping
Upstream
InCDS

Liver, Brain, Testis,
Spleen_B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

66017

ATG...

MVG...

ATG

Alternative
sORF
Upstream

B_cell, Spleen_B_cell, 3T3,
MEF, v6-5, Neutrophil,
Brain, Testis, E14,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq		3	sORFs_org_Mouse
831139	ENSMUST00000122160	Uspl1-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
829941	ENSMUST00000100410	Uspl1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

64100

174

CTG...

LWS...

CTG

Intronic
sORF
InCDS
Overlapping
Alternative
Upstream

Brain, R1E, 3T3,
E14, v6-5, Testis,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

63354

CTG...

LYA...

CTG

sORF
Upstream
Alternative

3T3, MEF, v6-5,
R1E, Brain, Liver,
Testis, Neutrophil, B_cell,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq		3	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse
831139	ENSMUST00000122160	Uspl1-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

61537

237

ATG...

MTS...

ATG

Intronic
sORF
InCDS
Overlapping
Alternative
Upstream

Brain, E14, R1E,
B_cell, Spleen_B_cell, 3T3,
v6-5, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

834083

165

CTG...

LWG...

CTG

Alternative
sORF
Upstream

E14, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
829941	ENSMUST00000100410	Uspl1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

62313

264

ATG...

MVN...

ATG

Alternative
Overlapping
sORF
Upstream
ncRNA
InCDS
Intronic

Brain, Testis, BMDC,
3T3, E14,
v6-5, R1E, Glioma,
Liver, MEF, MESC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
521217	ENSMUST00000149896	Uspl1-209	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
3052427	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

64242

114

CTG...

LLQ...

CTG

Alternative
Overlapping
sORF
Upstream
Intronic
InCDS

Spleen_B_cell, Brain, Testis,
Liver, R1E, 3T3,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

1085270

CTG...

LNS...

CTG

Alternative
Downstream
NMD
sORF

v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1085271	ENSMUST00000126168	Uspl1-207	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1064137

GTG...

VGT...

GTG

sORF
Upstream

MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
831139	ENSMUST00000122160	Uspl1-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1241169

ATG...

MVG...

ATG

sORF
Upstream

R1E, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

66621

138

ATG...

MVG...

ATG

sORF
Alternative
Upstream

3T3, E14, MEF,
v6-5, Brain, Testis,
B_cell, Glioma, Liver,
MESC, Spleen_B_cell,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq		4	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse Johnstone2016
3052427	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

1805753

264

TTG...

LGK...

TTG

ncRNA
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
521217	ENSMUST00000149896	Uspl1-209	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

65052

GTG...

VGT...

GTG

Alternative
sORF
Upstream

Brain, Testis, 3T3,
MEF, v6-5, B_cell,
Spleen_B_cell, R1E, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq		3	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
831139	ENSMUST00000122160	Uspl1-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse
829941	ENSMUST00000100410	Uspl1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

831138

174

TTG...

LLS...

TTG

Alternative
sORF
Upstream

E14, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
831139	ENSMUST00000122160	Uspl1-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

66888

135

GTG...

VGT...

GTG

Alternative
sORF
Upstream

Brain, Testis, 3T3,
E14, MEF, v6-5,
B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq		4	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1241583

186

TTG...

LLS...

TTG

Alternative
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

62584

ATG...

MLQ...

ATG

Intronic
sORF
Alternative
Upstream
ncRNA
InCDS
Overlapping

Testis, B_cell, BMDC,
E14, Spleen_B_cell, 3T3,
Brain, C2C12, MEF,
NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62585	ENSMUST00000200759	Uspl1-211	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
521217	ENSMUST00000149896	Uspl1-209	processed_transcript	Ribo-seq	moderate	3	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
831139	ENSMUST00000122160	Uspl1-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1063992

ATG...

MVG...

ATG

sORF
Upstream

MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
831139	ENSMUST00000122160	Uspl1-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse

63452

141

ATG...

MWL...

ATG

InCDS
Overlapping
sORF
Alternative
Upstream
Intronic

R1E, Spleen_B_cell, Brain,
Testis, Liver, 3T3,
E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

903213

132

CTG...

LEE...

CTG

Alternative
sORF
Upstream

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829941	ENSMUST00000100410	Uspl1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

66404

CTG...

LYA...

CTG

sORF
Alternative
Upstream

3T3, E14, B_cell,
Spleen_B_cell, Brain, Liver,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq		2	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1242541

AAG...

KRS...

AAG

sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

65393

144

ATG...

MMW...

ATG

Intronic
sORF
InCDS
Overlapping
Alternative
Upstream

Brain, Liver, 3T3,
E14, v6-5, R1E,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

190119

ATG...

MVC...

ATG

sORF
Alternative
InCDS
Overlapping

B_cell, Brain,
E14, MEF, NSC,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
3052427	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		8	sORFs_org_Mouse

66335

147

CTG...

LMM...

CTG

Intronic
sORF
Alternative
Overlapping
Upstream
InCDS

Brain, Liver, 3T3,
E14, v6-5, Spleen_B_cell,
Testis, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

64851

135

TTG...

LWP...

TTG

InCDS
Overlapping
sORF
Intronic
Alternative
Upstream

R1E, Brain, Liver,
3T3, E14, v6-5,
Testis, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

62958

162

GTG...

VRL...

GTG

InCDS
Overlapping
sORF
Alternative
Upstream
Intronic

R1E, Spleen_B_cell, Brain,
Testis, 3T3, E14,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

1090964

102

CTG...

LEE...

CTG

Alternative
sORF
Upstream

v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
831139	ENSMUST00000122160	Uspl1-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1235847

AAG...

KSQ...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
521217	ENSMUST00000149896	Uspl1-209	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

65156

GTG...

VSS...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic

Brain, Testis, Liver,
R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1236369

162

ATG...

MFT...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

Glioma, Liver, MEF,
MESC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	weak	1	Johnstone2016
3052427	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

63764

180

CTG...

LLL...

CTG

Alternative
Overlapping
sORF
Upstream
Intronic
InCDS

Spleen_B_cell, Brain, R1E,
Testis, 3T3, E14,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

523825

CTG...

LEE...

CTG

Alternative
sORF
Upstream

B_cell, BMDC, E14,
Spleen_B_cell, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829941	ENSMUST00000100410	Uspl1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse

61660

207

GTG...

VLT...

GTG

Alternative
Overlapping
sORF
Upstream
InCDS
Intronic

Brain, Testis, Spleen_B_cell,
R1E, 3T3, E14,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

829940

153

CTG...

LWG...

CTG

Alternative
sORF
Upstream

B_cell, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829941	ENSMUST00000100410	Uspl1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

62013

102

GTG...

VSH...

GTG

Alternative
Overlapping
sORF
Upstream
Intronic
InCDS

Brain, Testis, Liver,
R1E, 3T3, E14,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

833731

243

CTG...

LPQ...

CTG

Alternative
sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

65502

240

GTG...

VMT...

GTG

InCDS
Overlapping
sORF
Alternative
Upstream
Intronic

R1E, Brain, Testis,
3T3, E14, v6-5,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

829447

120

TTG...

LNV...

TTG

Alternative
sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1237060

AAG...

KRS...

AAG

sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

189593

105

TTG...

LEM...

TTG

Alternative
InCDS
Overlapping
sORF

B_cell, Brain, E14,
NSC, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		6	sORFs_org_Mouse

61480

252

ATG...

MEK...

ATG

Alternative
Overlapping
sORF
Upstream
ncRNA
InCDS
Intronic

Brain, Testis, BMDC,
B_cell, Spleen_B_cell, 3T3,
E14, v6-5, R1E,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61428	ENSMUST00000121416	Uspl1-205	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
521217	ENSMUST00000149896	Uspl1-209	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse

1806064

GTG...

VGT...

GTG

sORF
Upstream

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1801202

TTG...

LEM...

TTG

Alternative
InCDS
Overlapping
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1090104

ATG...

MAP...

ATG

Alternative
sORF
Upstream

v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
831139	ENSMUST00000122160	Uspl1-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1238634

ATG...

MVC...

ATG

Alternative
InCDS
Overlapping
sORF
ncRNA

R1E, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
521217	ENSMUST00000149896	Uspl1-209	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse

1787293

CTG...

LYA...

CTG

sORF
Upstream

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
831139	ENSMUST00000122160	Uspl1-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

902893

CTG...

LSF...

CTG

ncRNA
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
521217	ENSMUST00000149896	Uspl1-209	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

1238111

246

AAG...

KCV...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018574	ENSMUST00000150921	Uspl1-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1090722

GTG...

VQT...

GTG

Alternative
sORF
Upstream

v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
831139	ENSMUST00000122160	Uspl1-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

833222

GTG...

VDT...

GTG

InCDS
Overlapping
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516900	ENSMUST00000117878	Uspl1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1238382

CTG...

LAE...

CTG

sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1663331

CTG...

LYK...

CTG

Downstream
NMD
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1085271	ENSMUST00000126168	Uspl1-207	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

1237007

ATG...

MRR...

ATG

Alternative
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1805923

273

CTG...

LGY...

CTG

ncRNA
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
521217	ENSMUST00000149896	Uspl1-209	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

833284

222

TTG...

LLS...

TTG

Alternative
sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
831139	ENSMUST00000122160	Uspl1-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1242574

ATG...

MRR...

ATG

Alternative
sORF
Upstream

R1E, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
523826	ENSMUST00000050472	Uspl1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1804198

138

CTG...

LIQ...

CTG

InCDS
Overlapping
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

414698

AGG...

RSS...

AGG

sORF

C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq		1	sORFs_org_Mouse

414984

114

AGG...

RSS...

AGG

sORF

C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414699	ENSMUST00000139474	Uspl1-208	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1806374

CTG...

LYA...

CTG

sORF
Upstream

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
189594	ENSMUST00000119685	Uspl1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

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