12 ORFs 1 known transcript 12 ORF to known transcript associations
MetamORF
transcript ID
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
The MetamORF ID of the ORF. This is an unique ID referring to the ORF.
ORF
length
The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.
Nucleic
sequence
The nucleic sequence of the ORF.
Amino acid
sequence
The amino acid sequence of the ORF.
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12 ORFs 1 known transcript 12 ORF to known transcript associations
MetamORF
ORF ID
The MetamORF ID of the ORF. This is an unique ID referring to the ORF.
ORF Length
The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.
Nucleic
sequence
The nucleic sequence of the ORF.
Amino acid
sequence
The amino acid sequence of the ORF.
Start codon
The start codon sequence of the ORF.
ORF annotations
A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.
Cell types
A comma-separated list of all the cell types in which the ORF has already been identified.
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.
Transcript ID
The official transcript ID (usually an Ensembl ID, e.g.ENST00000395565).
Transcript name
The transcript name (e.g.MDK-202).
Transcript biotype
The biotype of the transcript (as defined by Ensembl).
Identification
The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.
The number of original datasets that identifed the ORF on the transcript.
Data sources
The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
