Gene NCBI:20587 | MetamORF

Gene

ID CARD

NCBI:20587

Aliases

AU020204
Baf47, ENSMUSG00000000902, Ini1
MGI:1328366, NCBI:20587, OFF:Smarcb1
Smarcb1, Snf5, SNF5/INI1

Chromosome

Transcripts

77 ORFs
6 known transcripts
172 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

432542

ENSMUST00000140388

Smarcb1-204

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
279745	135	CTG ...	LTF ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
80459	81	CTG ...	LDA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
535359	114	GTG ...	VIH ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain, MEF
428862	144	TTG ...	LNP ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
595936	36	CTG ...	LAP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Downstream NMD sORF	3T3
82571	72	GTG ...	VPC ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
508975	84	TTG ...	LGG ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
528623	60	CTG ...	LAA ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, B_cell, MEF, Spleen_B_cell
524856	168	CTG ...	LVD ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
259105	126	GTG ...	VPA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
6467	39	CTG ...	LRD ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell
515119	102	CTG ...	LCS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
1019175	183	CTG ...	LRM ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain
190682	48	CTG ...	LPF ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Liver
425507	90	CTG ...	LGL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
509431	183	GTG ...	VGN ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
284367	156	GTG ...	VGH ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Downstream NMD sORF	3T3, B_cell
532765	141	ATG ...	MSL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, Spleen_B_cell
426786	36	CTG ...	LSW ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell
519484	108	CTG ...	LKL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
248707	30	ATG ...	MDI ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, Brain, MEF, Spleen_B_cell
520502	165	GTG ...	VDQ ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
2283	81	CTG ...	LVP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
1024025	243	CTG ...	LAT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain
3658	84	GTG ...	VLV ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
285834	54	TTG ...	LPL ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Liver
85875	81	ATG ...	MLC ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
6588	78	GTG ...	VPI ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain
199686	102	CTG ...	LPN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
232489	150	CTG ...	LDL ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell, Brain, Spleen_B_cell
1027687	162	CTG ...	LYK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain
62453	78	CTG ...	LCP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, Spleen_B_cell
824991	195	GTG ...	VGN ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	B_cell, Brain
429245	195	CTG ...	LNI ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	3T3, B_cell
514807	105	GTG ...	VLR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Downstream NMD sORF	3T3, B_cell
174786	30	TTG ...	LSP ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Liver

248708

ENSMUST00000000925

Smarcb1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
445410	156	CTG ...	LCL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
248707	30	ATG ...	MDI ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
289350	93	ATG ...	MPS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
443457	150	GTG ...	VGH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
288883	96	CTG ...	LCP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF, Spleen_B_cell
445337	99	GTG ...	VLR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
284367	156	GTG ...	VGH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
290147	99	ATG ...	MLC ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF, Spleen_B_cell
287493	63	ATG ...	MVK ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
528623	60	CTG ...	LAA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF

2284

ENSMUST00000140408

Smarcb1-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
246830	42	CTG ...	LRC ...	Ribo-seq	CTG	weak	5	sORFs_org_Mouse	Intronic sORF	Brain, MEF, NSC
85875	81	ATG ...	MLC ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Spleen_B_cell
1557511	69	TTG ...	LCF ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
514807	105	GTG ...	VLR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
509431	183	GTG ...	VGN ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC
521040	39	TTG ...	LSP ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil
62453	78	CTG ...	LCP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	BMDC, Brain
232489	150	CTG ...	LDL ...	Ribo-seq	CTG	strong	6	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC
515119	102	CTG ...	LCS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil
508975	84	TTG ...	LGG ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil
199686	102	CTG ...	LPN ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	BMDC, Brain
4888	78	CTG ...	LRC ...	Ribo-seq	CTG	moderate	6	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, NSC, Skin_tumor, Spleen_B_cell
6588	78	GTG ...	VPI ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell
234120	66	TTG ...	LCQ ...	Ribo-seq	TTG	weak	6	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC
218484	84	GTG ...	VRT ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	Brain, NSC, Spleen_B_cell
1024025	243	CTG ...	LAT ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	Brain
425507	90	CTG ...	LGL ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil
248707	30	ATG ...	MDI ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF
1320212	156	GTG ...	VSP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
80459	81	CTG ...	LDA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	BMDC, Brain
595936	36	CTG ...	LAP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
280636	57	TTG ...	LPS ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, NSC
259105	126	GTG ...	VPA ...	Ribo-seq	GTG	weak	5	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Neutrophil, NSC
2283	81	CTG ...	LVP ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell
1564622	60	TTG ...	LAP ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
279745	135	CTG ...	LTF ...	Ribo-seq	CTG	weak	5	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Neutrophil, NSC
519484	108	CTG ...	LKL ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil
256684	33	CTG ...	LTS ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	Brain, MEF
174786	30	TTG ...	LSP ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Intronic sORF	Brain, Neutrophil, NSC
426786	36	CTG ...	LSW ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Neutrophil
175212	36	ATG ...	MLT ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
285834	54	TTG ...	LPL ...	Ribo-seq	TTG	weak	6	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC
190682	48	CTG ...	LPF ...	Ribo-seq	CTG	weak	6	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC
284367	156	GTG ...	VGH ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
428862	144	TTG ...	LNP ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC, Spleen_B_cell
535359	114	GTG ...	VIH ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, NSC, Spleen_B_cell
520502	165	GTG ...	VDQ ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC
3658	84	GTG ...	VLV ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell
1557714	39	TTG ...	LHF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Brain
524856	168	CTG ...	LVD ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC
521150	96	ATG ...	MRM ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Intronic sORF	Brain, NSC, Spleen_B_cell
523574	90	ATG ...	MRH ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, NSC, Spleen_B_cell
198449	30	GTG ...	VVP ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	Intronic sORF	Brain, MEF, NSC
4310	51	TTG ...	LSG ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Skin_tumor
82571	72	GTG ...	VPC ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Spleen_B_cell
6467	39	CTG ...	LRD ...	Ribo-seq	CTG		10	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell, Testis
429245	195	CTG ...	LNI ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, MEF, Neutrophil, NSC

423716

ENSMUST00000133189

Smarcb1-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
218484	84	GTG ...	VRT ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
1688926	48	TTG ...	LKC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	MEF
80459	81	CTG ...	LDA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
175212	36	ATG ...	MLT ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, Spleen_B_cell
426786	36	CTG ...	LSW ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
3658	84	GTG ...	VLV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Liver
508975	84	TTG ...	LGG ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
1557714	39	TTG ...	LHF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	MEF
425507	90	CTG ...	LGL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
198449	30	GTG ...	VVP ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, Spleen_B_cell
6467	39	CTG ...	LRD ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
82571	72	GTG ...	VPC ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Liver
4310	51	TTG ...	LSG ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
259105	126	GTG ...	VPA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
256684	33	CTG ...	LTS ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, Spleen_B_cell
232489	150	CTG ...	LDL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
280636	57	TTG ...	LPS ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Spleen_B_cell
6588	78	GTG ...	VPI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Liver
521040	39	TTG ...	LSP ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	MEF, Spleen_B_cell
428862	144	TTG ...	LNP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Liver
535359	114	GTG ...	VIH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Liver
279745	135	CTG ...	LTF ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
514807	105	GTG ...	VLR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
4888	78	CTG ...	LRC ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
429245	195	CTG ...	LNI ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, Liver, Spleen_B_cell
199686	102	CTG ...	LPN ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
520502	165	GTG ...	VDQ ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
246830	42	CTG ...	LRC ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	MEF
519484	108	CTG ...	LKL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
515119	102	CTG ...	LCS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
509431	183	GTG ...	VGN ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
2283	81	CTG ...	LVP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
524856	168	CTG ...	LVD ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
284367	156	GTG ...	VGH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell

62454

ENSMUST00000146555

Smarcb1-206

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
80459	81	CTG ...	LDA ...	Ribo-seq	CTG		8	sORFs_org_Mouse	NMD sORF	B_cell, Brain, E14, MEF, NSC, Testis
199686	102	CTG ...	LPN ...	Ribo-seq	CTG		6	sORFs_org_Mouse	NMD sORF	B_cell, Brain, E14, MEF, Neutrophil
82571	72	GTG ...	VPC ...	Ribo-seq	GTG		8	sORFs_org_Mouse	NMD sORF	B_cell, Brain, E14, MEF, NSC, Testis
1281430	135	AAG ...	KAK ...	Ribo-seq	AAG		1	sORFs_org_Mouse	NMD sORF	E14
1231622	177	ACG ...	TRS ...	Ribo-seq	ACG		1	sORFs_org_Mouse	NMD sORF	E14
1245981	204	CTG ...	LFH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	E14
1320212	156	GTG ...	VSP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	E14
1026506	231	GTG ...	VTL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	Brain
1269085	198	AAG ...	KRS ...	Ribo-seq	AAG		1	sORFs_org_Mouse	NMD sORF	E14
62453	78	CTG ...	LCP ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	Brain, E14, MEF, Testis
85875	81	ATG ...	MLC ...	Ribo-seq	ATG		4	sORFs_org_Mouse	NMD sORF	Brain, E14, MEF, Testis
1229744	48	AGG ...	RNR ...	Ribo-seq	AGG		1	sORFs_org_Mouse	NMD sORF	E14

573366

ENSMUST00000121304

Smarcb1-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
595936	36	CTG ...	LAP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, R1E
521150	96	ATG ...	MRM ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	E14, Glioma, Liver, MEF, MESC
1526105	162	GTG ...	VLG ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF, NSC
445410	156	CTG ...	LCL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, MEF
573365	207	ATG ...	MRT ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse Johnstone2016	Alternative Overlapping sORF Upstream	3T3, Glioma, Liver, MEF, MESC
1594822	57	CTG ...	LMP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
290147	99	ATG ...	MLC ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, R1E
234120	66	TTG ...	LCQ ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, v6-5
636306	138	ATG ...	MSL ...	Ribo-seq	ATG		10	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, Brain, E14, MEF, NSC, R1E, v6-5
280636	57	TTG ...	LPS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
285834	54	TTG ...	LPL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
1247072	48	AGG ...	RTA ...	Ribo-seq	AGG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
764903	57	CTG ...	LAA ...	Ribo-seq	CTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, MEF, NSC, v6-5
523574	90	ATG ...	MRH ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1527200	165	GTG ...	VVL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF, NSC
445337	99	GTG ...	VLR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
287493	63	ATG ...	MVK ...	Ribo-seq	ATG		1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
246830	42	CTG ...	LRC ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, v6-5
443457	150	GTG ...	VGH ...	Ribo-seq	GTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, R1E
284367	156	GTG ...	VGH ...	Ribo-seq	GTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, R1E, v6-5
289350	93	ATG ...	MPS ...	Ribo-seq	ATG		3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, E14, Glioma, Liver, MEF, MESC
218484	84	GTG ...	VRT ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, R1E, v6-5
1252450	33	ATC ...	INP ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
528623	60	CTG ...	LAA ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, E14, MEF, NSC, R1E, v6-5
288883	96	CTG ...	LCP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, R1E
514807	105	GTG ...	VLR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, R1E
4310	51	TTG ...	LSG ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, v6-5
85875	81	ATG ...	MLC ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
62453	78	CTG ...	LCP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
1252344	60	ATA ...	IQH ...	Ribo-seq	ATA		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
1594660	54	ATG ...	MPR ...	Ribo-seq	ATG		2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
175212	36	ATG ...	MLT ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1573478	174	GTG ...	VSP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain

3008272

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
573365	207	ATG ...	MRT ...	Predicted	ATG		1	Samandi2017	sORF
521150	96	ATG ...	MRM ...	Predicted	ATG		1	Samandi2017	sORF
289350	93	ATG ...	MPS ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

77 ORFs
6 known transcripts
172 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

279745

135

CTG...

LTF...

CTG

Alternative
Downstream
NMD
sORF
Intronic

3T3, B_cell, Brain,
MEF, Neutrophil, NSC,
Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	weak	5	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

445410

156

CTG...

LCL...

CTG

InCDS
Overlapping
sORF

Spleen_B_cell, Brain, E14,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
248708	ENSMUST00000000925	Smarcb1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

248707

ATG...

MDI...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic
NMD

Brain, BMDC, MEF,
3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
248708	ENSMUST00000000925	Smarcb1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

246830

CTG...

LRC...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

Brain, MEF, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	weak	5	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

85875

ATG...

MLC...

ATG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

BMDC, Brain, Spleen_B_cell,
3T3, E14, MEF,
Testis, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
62454	ENSMUST00000146555	Smarcb1-206	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

218484

GTG...

VRT...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, Brain, NSC,
Spleen_B_cell, E14, MEF,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		4	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		4	sORFs_org_Mouse

80459

CTG...

LDA...

CTG

InCDS
NMD
Overlapping
sORF
Intronic

3T3, B_cell, Brain,
E14, MEF, NSC,
Testis, Liver, Spleen_B_cell,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
62454	ENSMUST00000146555	Smarcb1-206	nonsense_mediated_decay	Ribo-seq		8	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1557511

TTG...

LCF...

TTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

514807

105

GTG...

VLR...

GTG

Intronic
sORF
InCDS
Overlapping
Downstream
NMD

Brain, MEF, Spleen_B_cell,
E14, R1E, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

199686

102

CTG...

LPN...

CTG

NMD
sORF
Intronic
InCDS
Overlapping

B_cell, Brain, E14,
MEF, Neutrophil, BMDC,
Liver, Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62454	ENSMUST00000146555	Smarcb1-206	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

595936

CTG...

LAP...

CTG

InCDS
Overlapping
sORF
Downstream
NMD
Intronic

E14, R1E, 3T3,
Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse

521150

ATG...

MRM...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

E14, Glioma, Liver,
MEF, MESC,
Brain, NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse Johnstone2016
3008272	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse

1688926

TTG...

LKC...

TTG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

509431

183

GTG...

VGN...

GTG

Intronic
sORF
Alternative
Downstream
NMD

BMDC, Brain, MEF,
Neutrophil, NSC, 3T3,
B_cell, Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		6	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1526105

162

GTG...

VLG...

GTG

InCDS
Overlapping
sORF

Brain, MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

521040

TTG...

LSP...

TTG

Intronic
sORF

BMDC, Brain, MEF,
Neutrophil, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

175212

ATG...

MLT...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, Brain, Spleen_B_cell,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

62453

CTG...

LCP...

CTG

Intronic
sORF
NMD
Alternative
InCDS
Overlapping

BMDC, Brain, E14,
MEF, Testis, 3T3,
Spleen_B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
62454	ENSMUST00000146555	Smarcb1-206	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

535359

114

GTG...

VIH...

GTG

Alternative
Downstream
NMD
sORF
Intronic

3T3, B_cell, Brain,
MEF, Liver, BMDC,
NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		5	sORFs_org_Mouse

232489

150

CTG...

LDL...

CTG

Intronic
sORF
Alternative
Downstream
NMD

BMDC, Brain, MEF,
Neutrophil, NSC, Liver,
3T3, B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	strong	6	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

515119

102

CTG...

LCS...

CTG

Intronic
sORF
Alternative
Downstream
NMD

BMDC, Brain, MEF,
Neutrophil, 3T3, B_cell,
Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		4	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

428862

144

TTG...

LNP...

TTG

Alternative
Downstream
NMD
sORF
Intronic

3T3, B_cell, Brain,
Liver, BMDC, MEF,
Neutrophil, NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	moderate	6	sORFs_org_Mouse

82571

GTG...

VPC...

GTG

NMD
sORF
InCDS
Overlapping
Intronic

B_cell, Brain, E14,
MEF, NSC, Testis,
3T3, Liver, BMDC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62454	ENSMUST00000146555	Smarcb1-206	nonsense_mediated_decay	Ribo-seq		8	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse

426786

CTG...

LSW...

CTG

Intronic
sORF
Alternative
Downstream
NMD

Liver, Spleen_B_cell, 3T3,
B_cell, Brain, MEF,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse

573365

207

ATG...

MRT...

ATG

Alternative
Overlapping
sORF
Upstream

3T3, Glioma, Liver,
MEF, MESC,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse Johnstone2016
3008272	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

1594822

CTG...

LMP...

CTG

Alternative
InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

508975

TTG...

LGG...

TTG

Intronic
sORF
Alternative
Downstream
NMD

BMDC, Brain, MEF,
Neutrophil, Liver, Spleen_B_cell,
3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		4	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

3658

GTG...

VLV...

GTG

Intronic
sORF
Alternative
Downstream
NMD

Liver, 3T3, B_cell,
Brain, BMDC, MEF,
Neutrophil, NSC, Skin_tumor,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		8	sORFs_org_Mouse

4888

CTG...

LRC...

CTG

Intronic
sORF

BMDC, Brain, MEF,
NSC, Skin_tumor, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	moderate	6	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

6588

GTG...

VPI...

GTG

Intronic
sORF
Alternative
Downstream
NMD

BMDC, Brain, MEF,
Neutrophil, NSC, Skin_tumor,
Spleen_B_cell, Liver, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		8	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

528623

CTG...

LAA...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

3T3, B_cell, MEF,
Spleen_B_cell, BMDC, Brain,
E14, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		8	sORFs_org_Mouse
248708	ENSMUST00000000925	Smarcb1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

289350

ATG...

MPS...

ATG

Alternative
InCDS
Overlapping
sORF

Brain, 3T3,
E14, Glioma, Liver,
MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
248708	ENSMUST00000000925	Smarcb1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
3008272	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse Johnstone2016

524856

168

CTG...

LVD...

CTG

Alternative
Downstream
NMD
sORF
Intronic

3T3, B_cell, Brain,
BMDC, MEF, Neutrophil,
NSC, Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		6	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

234120

TTG...

LCQ...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping

BMDC, Brain, MEF,
Neutrophil, NSC, E14,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	weak	6	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

1281430

135

AAG...

KAK...

AAG

NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62454	ENSMUST00000146555	Smarcb1-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1024025

243

CTG...

LAT...

CTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1557714

TTG...

LHF...

TTG

Intronic
sORF

MEF, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

425507

CTG...

LGL...

CTG

Intronic
sORF
Alternative
Downstream
NMD

Liver, Spleen_B_cell, BMDC,
Brain, MEF, Neutrophil,
3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		4	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

259105

126

GTG...

VPA...

GTG

Alternative
Downstream
NMD
sORF
Intronic

3T3, B_cell, Brain,
Liver, Spleen_B_cell, MEF,
Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	weak	5	sORFs_org_Mouse

290147

ATG...

MLC...

ATG

Alternative
InCDS
Overlapping
sORF

BMDC, R1E, Brain,
MEF, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
248708	ENSMUST00000000925	Smarcb1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1231622

177

ACG...

TRS...

ACG

NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62454	ENSMUST00000146555	Smarcb1-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

198449

GTG...

VVP...

GTG

Intronic
sORF

3T3, Brain, Spleen_B_cell,
MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse

6467

CTG...

LRD...

CTG

Alternative
Downstream
NMD
sORF
Intronic

3T3, B_cell, Liver,
BMDC, Brain, MEF,
Neutrophil, NSC, Skin_tumor,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		10	sORFs_org_Mouse

443457

150

GTG...

VGH...

GTG

InCDS
Overlapping
sORF

Spleen_B_cell, 3T3, E14,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
248708	ENSMUST00000000925	Smarcb1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		4	sORFs_org_Mouse

1019175

183

CTG...

LRM...

CTG

InCDS
NMD
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

636306

138

ATG...

MSL...

ATG

InCDS
Overlapping
sORF

3T3, B_cell, Brain,
E14, MEF, NSC,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		10	sORFs_org_Mouse

1320212

156

GTG...

VSP...

GTG

Intronic
sORF
NMD

Brain, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
62454	ENSMUST00000146555	Smarcb1-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

280636

TTG...

LPS...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

MEF, 3T3, Spleen_B_cell,
BMDC, Brain, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse

288883

CTG...

LCP...

CTG

Alternative
InCDS
Overlapping
sORF

Brain, MEF, Spleen_B_cell,
3T3, BMDC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
248708	ENSMUST00000000925	Smarcb1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

285834

TTG...

LPL...

TTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD
Intronic

v6-5, B_cell, Liver,
BMDC, Brain, MEF,
Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	weak	6	sORFs_org_Mouse

4310

TTG...

LSG...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, E14, MEF,
v6-5, Brain, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

256684

CTG...

LTS...

CTG

Intronic
sORF

3T3, Brain, Spleen_B_cell,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

190682

CTG...

LPF...

CTG

Alternative
Downstream
NMD
sORF
Intronic

B_cell, Liver, BMDC,
Brain, MEF, Neutrophil,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	weak	6	sORFs_org_Mouse

1247072

AGG...

RTA...

AGG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

764903

CTG...

LAA...

CTG

InCDS
Overlapping
sORF

B_cell, MEF, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		5	sORFs_org_Mouse

523574

ATG...

MRH...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

E14, BMDC, Brain,
MEF, NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse

284367

156

GTG...

VGH...

GTG

Downstream
NMD
sORF
InCDS
Overlapping
Intronic

3T3, B_cell, E14,
MEF, R1E, v6-5,
Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		5	sORFs_org_Mouse
248708	ENSMUST00000000925	Smarcb1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

532765

141

ATG...

MSL...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

1527200

165

GTG...

VVL...

GTG

InCDS
Overlapping
sORF

Brain, MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

445337

GTG...

VLR...

GTG

InCDS
Overlapping
sORF

3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
248708	ENSMUST00000000925	Smarcb1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

519484

108

CTG...

LKL...

CTG

Alternative
Downstream
NMD
sORF
Intronic

3T3, B_cell, Brain,
BMDC, MEF, Neutrophil,
Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		4	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

2283

CTG...

LVP...

CTG

Intronic
sORF
Alternative
Downstream
NMD

BMDC, Brain, MEF,
Neutrophil, NSC, Skin_tumor,
Spleen_B_cell, 3T3, B_cell,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		8	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1564622

TTG...

LAP...

TTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1245981

204

CTG...

LFH...

CTG

NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62454	ENSMUST00000146555	Smarcb1-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

287493

ATG...

MVK...

ATG

Alternative
InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		1	Johnstone2016
248708	ENSMUST00000000925	Smarcb1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

520502

165

GTG...

VDQ...

GTG

Alternative
Downstream
NMD
sORF
Intronic

3T3, B_cell, Brain,
Liver, Spleen_B_cell, BMDC,
MEF, Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		6	sORFs_org_Mouse

174786

TTG...

LSP...

TTG

Intronic
sORF
Alternative
Downstream
NMD

Brain, Neutrophil, NSC,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1026506

231

GTG...

VTL...

GTG

NMD
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62454	ENSMUST00000146555	Smarcb1-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1269085

198

AAG...

KRS...

AAG

NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62454	ENSMUST00000146555	Smarcb1-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

429245

195

CTG...

LNI...

CTG

Intronic
sORF
Alternative
Downstream
NMD

Brain, Liver, Spleen_B_cell,
3T3, B_cell, BMDC,
MEF, Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
423716	ENSMUST00000133189	Smarcb1-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
2284	ENSMUST00000140408	Smarcb1-205	retained_intron	Ribo-seq		6	sORFs_org_Mouse

1252450

ATC...

INP...

ATC

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1027687

162

CTG...

LYK...

CTG

InCDS
NMD
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

824991

195

GTG...

VGN...

GTG

InCDS
NMD
Overlapping
sORF

B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
432542	ENSMUST00000140388	Smarcb1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

1229744

AGG...

RNR...

AGG

NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62454	ENSMUST00000146555	Smarcb1-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1252344

ATA...

IQH...

ATA

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1594660

ATG...

MPR...

ATG

Alternative
InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse Johnstone2016

1573478

174

GTG...

VSP...

GTG

Alternative
InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573366	ENSMUST00000121304	Smarcb1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

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