Gene NCBI:19303 | MetamORF

Gene

ID CARD

NCBI:19303

Aliases

AW108311
AW123232, ENSMUSG00000029528, MGI:108295
NCBI:19303, OFF:Pxn, Pax
Pxn

Chromosome

Transcripts

83 ORFs
12 known transcripts
161 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

67006

ENSMUST00000125007

Pxn-203

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
568594	93	TTG ...	LSG ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
559312	39	TTG ...	LDE ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
564031	183	TTG ...	LPG ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
522645	36	GTG ...	VLH ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	3T3
906040	270	AGG ...	REC ...	Ribo-seq	AGG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
565689	153	TTG ...	LQP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
559609	66	CTG ...	LGD ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	3T3
184493	84	CTG ...	LKQ ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	ncRNA sORF	3T3
568658	69	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
569250	132	TTG ...	LGG ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
517228	129	CTG ...	LDS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
516701	153	TTG ...	LST ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	ncRNA sORF	3T3
560608	51	GTG ...	VES ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
563088	72	CTG ...	LED ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
518183	108	CTG ...	LQS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
67005	276	GTG ...	VCR ...	Ribo-seq	GTG		9	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, Brain, E14, MEF, Neutrophil, R1E, Testis
567268	66	ATG ...	MAP ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	ncRNA sORF	3T3
562107	159	CTG ...	LSL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
519066	117	TTG ...	LGS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
565531	111	TTG ...	LDP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
565225	111	CTG ...	LVK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
569495	51	TTG ...	LPK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
559301	108	GTG ...	VKE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
518284	45	GTG ...	VHP ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	ncRNA sORF	3T3
520748	177	CTG ...	LCS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	ncRNA sORF	3T3
169796	63	GTG ...	VRP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
569646	99	TTG ...	LLP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
565691	30	CTG ...	LES ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
561491	171	CTG ...	LSP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
562876	138	TTG ...	LCA ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
572678	153	CTG ...	LPP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	B_cell, MEF
522219	36	CTG ...	LPG ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	ncRNA sORF	3T3
569827	36	GTG ...	VEP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
570203	84	CTG ...	LGA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	ncRNA sORF	3T3
518952	99	GTG ...	VCA ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	ncRNA sORF	3T3
516786	129	GTG ...	VRS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	3T3
519373	96	CTG ...	LNK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
560925	30	CTG ...	LNL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	ncRNA sORF	3T3

560918

ENSMUST00000086523

Pxn-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
568658	69	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
522219	36	CTG ...	LPG ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
828406	72	TTG ...	LRC ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Neutrophil
570956	75	GTG ...	VRR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
905588	90	ACG ...	TDS ...	Ribo-seq	ACG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
518886	30	CTG ...	LRT ...	Ribo-seq	CTG		7	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, E14, MEF, Neutrophil, NSC
516701	153	TTG ...	LST ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
1312270	72	GTG ...	VPS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
572484	117	TTG ...	LDP ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
571180	144	TTG ...	LCA ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
518284	45	GTG ...	VHP ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
573963	54	TTG ...	LPK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
568594	93	TTG ...	LSG ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Neutrophil
560925	30	CTG ...	LNL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1559698	30	GTG ...	VWS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
1313605	111	TTG ...	LFP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
562876	138	TTG ...	LCA ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Neutrophil
569827	36	GTG ...	VEP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
564207	186	ATG ...	MPC ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Neutrophil
574740	282	TTG ...	LLP ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
567113	96	CTG ...	LET ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Neutrophil
574483	39	GTG ...	VEP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
565531	111	TTG ...	LDP ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Neutrophil
571371	255	GTG ...	VPS ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
559609	66	CTG ...	LGD ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, MEF
2552	33	CTG ...	LLL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
570203	84	CTG ...	LGA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
516786	129	GTG ...	VRS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
571076	99	TTG ...	LSG ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
569495	51	TTG ...	LPK ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil

573584

ENSMUST00000153682

Pxn-211

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
830240	273	CTG ...	LAD ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	E14
573583	213	TTG ...	LED ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
574420	219	CTG ...	LAL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	3T3

169797

ENSMUST00000152156

Pxn-210

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
516701	153	TTG ...	LST ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
518284	45	GTG ...	VHP ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
520748	177	CTG ...	LCS ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	BMDC, Liver, Spleen_B_cell
1312270	72	GTG ...	VPS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	BMDC
560925	30	CTG ...	LNL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
517357	96	TTG ...	LRG ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Liver, MEF, Neutrophil, Spleen_B_cell
519066	117	TTG ...	LGS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
516786	129	GTG ...	VRS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
831908	111	CTG ...	LGS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	BMDC, Liver
905145	138	ACG ...	TAK ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Intronic sORF	BMDC
904860	123	AAG ...	KKF ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Intronic sORF	BMDC
565531	111	TTG ...	LDP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	BMDC
568658	69	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	BMDC
567113	96	CTG ...	LET ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	BMDC
518886	30	CTG ...	LRT ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	BMDC, Liver, Spleen_B_cell
184493	84	CTG ...	LKQ ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Liver, Spleen_B_cell
828406	72	TTG ...	LRC ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	BMDC
562876	138	TTG ...	LCA ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	BMDC
518952	99	GTG ...	VCA ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Intronic sORF	BMDC, Liver, Spleen_B_cell
902666	84	ACG ...	TDS ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Intronic sORF	BMDC
1236992	42	ACG ...	TGS ...	Ribo-seq	ACG	strong	1	sORFs_org_Mouse	Intronic sORF	E14
517228	129	CTG ...	LDS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
522645	36	GTG ...	VLH ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
169796	63	GTG ...	VRP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
414576	99	AAG ...	KLR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	BMDC
903983	144	ACG ...	TGS ...	Ribo-seq	ACG	strong	1	sORFs_org_Mouse	Intronic sORF	BMDC
564207	186	ATG ...	MPC ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
830435	207	ATG ...	MDT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	Neutrophil
518183	108	CTG ...	LQS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
414611	264	TTG ...	LES ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	BMDC
568594	93	TTG ...	LSG ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	BMDC
904179	45	AAG ...	KGS ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	BMDC
830240	273	CTG ...	LAD ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	BMDC
904403	81	ACG ...	TRK ...	Ribo-seq	ACG	weak	2	sORFs_org_Mouse	Intronic sORF	BMDC, E14
65900	111	CTG ...	LDA ...	Ribo-seq	CTG		9	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, BMDC, E14, Liver, MEF, Neutrophil, Spleen_B_cell
901479	228	GTG ...	VFL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	BMDC

828407

ENSMUST00000134198

Pxn-206

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
831070	276	CTG ...	LLA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
565498	192	TTG ...	LQM ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	B_cell
828406	72	TTG ...	LRC ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	B_cell
830435	207	ATG ...	MDT ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	B_cell
567113	96	CTG ...	LET ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	B_cell
564207	186	ATG ...	MPC ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	B_cell
830240	273	CTG ...	LAD ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell

570957

ENSMUST00000202564

Pxn-213

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
570956	75	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
574483	39	GTG ...	VEP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
571076	99	TTG ...	LSG ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC
572678	153	CTG ...	LPP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
574740	282	TTG ...	LLP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
571371	255	GTG ...	VPS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
573963	54	TTG ...	LPK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
2552	33	CTG ...	LLL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
572484	117	TTG ...	LDP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
571180	144	TTG ...	LCA ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC

2553

ENSMUST00000067268

Pxn-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
518886	30	CTG ...	LRT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	R1E
1559698	30	GTG ...	VWS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
517357	96	TTG ...	LRG ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	R1E
2552	33	CTG ...	LLL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Skin_tumor
523166	63	GTG ...	VWS ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E, Spleen_B_cell
572484	117	TTG ...	LDP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
65900	111	CTG ...	LDA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	R1E, Testis
414576	99	AAG ...	KLR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	C2C12
567268	66	ATG ...	MAP ...	Ribo-seq	ATG	strong	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
564207	186	ATG ...	MPC ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC

564208

ENSMUST00000129897

Pxn-205

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
567113	96	CTG ...	LET ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	3T3
564207	186	ATG ...	MPC ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	ncRNA sORF	3T3
565498	192	TTG ...	LQM ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3

829236

ENSMUST00000125054

Pxn-204

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
829547	204	GTG ...	VEL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
830431	69	CTG ...	LNA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
904259	117	ACG ...	TAW ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Intronic sORF	BMDC
831870	75	CTG ...	LEL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
565689	153	TTG ...	LQP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
560925	30	CTG ...	LNL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	B_cell, MEF
561491	171	CTG ...	LSP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
562107	159	CTG ...	LSL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
831151	81	CTG ...	LLL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC
829843	171	CTG ...	LTQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
831908	111	CTG ...	LGS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell

518285

ENSMUST00000138139

Pxn-208

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
565531	111	TTG ...	LDP ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	R1E
568658	69	GTG ...	VRR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
519373	96	CTG ...	LNK ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Liver, R1E, Spleen_B_cell
518284	45	GTG ...	VHP ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
522219	36	CTG ...	LPG ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
562876	138	TTG ...	LCA ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E

414612

ENSMUST00000137716

Pxn-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
901479	228	GTG ...	VFL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	R1E
567113	96	CTG ...	LET ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF	R1E
1800176	222	TTG ...	LSE ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	R1E
831070	276	CTG ...	LLA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	R1E
830240	273	CTG ...	LAD ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	R1E
414611	264	TTG ...	LES ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	C2C12, R1E

906261

ENSMUST00000212819

Pxn-214

protein_coding

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

906260

ACG ...

TAW ...

Ribo-seq

ACG

sORFs_org_Mouse

BMDC

3010315

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
564207	186	ATG ...	MPC ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

83 ORFs
12 known transcripts
161 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

568594

TTG...

LSG...

TTG

ncRNA
sORF
InCDS
Overlapping
Intronic

3T3, B_cell, Neutrophil,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

568658

GTG...

VRR...

GTG

InCDS
Overlapping
sORF
Intronic
ncRNA

B_cell, R1E, 3T3,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
518285	ENSMUST00000138139	Pxn-208	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

830240

273

CTG...

LAD...

CTG

ncRNA
sORF
Intronic

E14, B_cell, R1E,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573584	ENSMUST00000153682	Pxn-211	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
828407	ENSMUST00000134198	Pxn-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse
414612	ENSMUST00000137716	Pxn-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

516701

153

TTG...

LST...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

Spleen_B_cell, B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

831070

276

CTG...

LLA...

CTG

Intronic
sORF

B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828407	ENSMUST00000134198	Pxn-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse
414612	ENSMUST00000137716	Pxn-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

559312

TTG...

LDE...

TTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

570956

GTG...

VRR...

GTG

InCDS
Overlapping
sORF

3T3, B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
570957	ENSMUST00000202564	Pxn-213	protein_coding	Ribo-seq		1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

518284

GTG...

VHP...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

BMDC, B_cell, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
518285	ENSMUST00000138139	Pxn-208	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

518886

CTG...

LRT...

CTG

Alternative
Overlapping
sORF
Upstream
Intronic

R1E, 3T3, B_cell,
E14, MEF, Neutrophil,
NSC, BMDC, Liver,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2553	ENSMUST00000067268	Pxn-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		7	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		3	sORFs_org_Mouse

567113

CTG...

LET...

CTG

ncRNA
sORF
Intronic
Alternative
InCDS
Overlapping

3T3, B_cell, BMDC,
R1E, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564208	ENSMUST00000129897	Pxn-205	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
828407	ENSMUST00000134198	Pxn-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
414612	ENSMUST00000137716	Pxn-207	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1559698

GTG...

VWS...

GTG

Alternative
InCDS
Overlapping
sORF

R1E, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2553	ENSMUST00000067268	Pxn-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

520748

177

CTG...

LCS...

CTG

Intronic
sORF
ncRNA

BMDC, Liver, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

522219

CTG...

LPG...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic
ncRNA

B_cell, Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
518285	ENSMUST00000138139	Pxn-208	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

828406

TTG...

LRC...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

Neutrophil, B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
828407	ENSMUST00000134198	Pxn-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

829547

204

GTG...

VEL...

GTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829236	ENSMUST00000125054	Pxn-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

517357

TTG...

LRG...

TTG

Alternative
Overlapping
sORF
Upstream
Intronic

R1E, 3T3, B_cell,
Liver, MEF, Neutrophil,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2553	ENSMUST00000067268	Pxn-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		7	sORFs_org_Mouse

565531

111

TTG...

LDP...

TTG

Intronic
sORF
ncRNA
InCDS
Overlapping

R1E, BMDC, 3T3,
B_cell, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
518285	ENSMUST00000138139	Pxn-208	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

905588

ACG...

TDS...

ACG

InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

564031

183

TTG...

LPG...

TTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

574483

GTG...

VEP...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
570957	ENSMUST00000202564	Pxn-213	protein_coding	Ribo-seq		1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

565498

192

TTG...

LQM...

TTG

Intronic
sORF
ncRNA

B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828407	ENSMUST00000134198	Pxn-206	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
564208	ENSMUST00000129897	Pxn-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1312270

GTG...

VPS...

GTG

Intronic
sORF
InCDS
Overlapping

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

522645

GTG...

VLH...

GTG

ncRNA
sORF
Intronic

3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

901479

228

GTG...

VFL...

GTG

sORF
Intronic

R1E, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414612	ENSMUST00000137716	Pxn-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

560925

CTG...

LNL...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

BMDC, MEF, B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
829236	ENSMUST00000125054	Pxn-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

519373

CTG...

LNK...

CTG

Intronic
sORF
ncRNA

Liver, R1E, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
518285	ENSMUST00000138139	Pxn-208	retained_intron	Ribo-seq		3	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

572484

117

TTG...

LDP...

TTG

InCDS
Overlapping
sORF

B_cell, BMDC, R1E,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
2553	ENSMUST00000067268	Pxn-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
570957	ENSMUST00000202564	Pxn-213	protein_coding	Ribo-seq		1	sORFs_org_Mouse

571180

144

TTG...

LCA...

TTG

InCDS
Overlapping
sORF

B_cell, 3T3, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
570957	ENSMUST00000202564	Pxn-213	protein_coding	Ribo-seq		2	sORFs_org_Mouse

906040

270

AGG...

REC...

AGG

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

2552

CTG...

LLL...

CTG

Alternative
InCDS
Overlapping
sORF

Skin_tumor, 3T3, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2553	ENSMUST00000067268	Pxn-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
570957	ENSMUST00000202564	Pxn-213	protein_coding	Ribo-seq		1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

565689

153

TTG...

LQP...

TTG

ncRNA
sORF
Intronic

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
829236	ENSMUST00000125054	Pxn-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

559609

CTG...

LGD...

CTG

ncRNA
sORF
Alternative
InCDS
Overlapping

3T3, B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

519066

117

TTG...

LGS...

TTG

Intronic
sORF
ncRNA

Liver, Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

184493

CTG...

LKQ...

CTG

ncRNA
sORF
Intronic

3T3, BMDC, Brain,
Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse

571076

TTG...

LSG...

TTG

InCDS
Overlapping
sORF

3T3, BMDC, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
570957	ENSMUST00000202564	Pxn-213	protein_coding	Ribo-seq		2	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

516786

129

GTG...

VRS...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

Spleen_B_cell, B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

564207

186

ATG...

MPC...

ATG

ncRNA
sORF
Alternative
InCDS
Overlapping
Intronic

3T3, E14, Neutrophil,
B_cell, BMDC, Glioma,
Liver, MEF, MESC,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564208	ENSMUST00000129897	Pxn-205	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
828407	ENSMUST00000134198	Pxn-206	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
2553	ENSMUST00000067268	Pxn-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
3010315	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

569250

132

TTG...

LGG...

TTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

573963

TTG...

LPK...

TTG

Alternative
InCDS
Overlapping
sORF

MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
570957	ENSMUST00000202564	Pxn-213	protein_coding	Ribo-seq		1	sORFs_org_Mouse

523166

GTG...

VWS...

GTG

Alternative
InCDS
Overlapping
sORF

R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2553	ENSMUST00000067268	Pxn-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

831908

111

CTG...

LGS...

CTG

Intronic
sORF

BMDC, Liver, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
829236	ENSMUST00000125054	Pxn-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

517228

129

CTG...

LDS...

CTG

ncRNA
sORF
Intronic

3T3, Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse

905145

138

ACG...

TAK...

ACG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

572678

153

CTG...

LPP...

CTG

Alternative
InCDS
Overlapping
sORF
ncRNA

3T3, B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
570957	ENSMUST00000202564	Pxn-213	protein_coding	Ribo-seq		1	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

904860

123

AAG...

KKF...

AAG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

830431

CTG...

LNA...

CTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829236	ENSMUST00000125054	Pxn-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

560608

GTG...

VES...

GTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

830435

207

ATG...

MDT...

ATG

Intronic
sORF

B_cell, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828407	ENSMUST00000134198	Pxn-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

563088

CTG...

LED...

CTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

518183

108

CTG...

LQS...

CTG

ncRNA
sORF
Intronic

3T3, Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1313605

111

TTG...

LFP...

TTG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

562876

138

TTG...

LCA...

TTG

InCDS
Overlapping
sORF
Intronic
ncRNA

B_cell, Neutrophil, BMDC,
R1E, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
518285	ENSMUST00000138139	Pxn-208	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

569827

GTG...

VEP...

GTG

Alternative
InCDS
Overlapping
sORF
ncRNA

MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

67005

276

GTG...

VCR...

GTG

ncRNA
sORF

3T3, B_cell, BMDC,
Brain, E14, MEF,
Neutrophil, R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

574740

282

TTG...

LLP...

TTG

InCDS
Overlapping
sORF

3T3, B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
570957	ENSMUST00000202564	Pxn-213	protein_coding	Ribo-seq		1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

904259

117

ACG...

TAW...

ACG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829236	ENSMUST00000125054	Pxn-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1800176

222

TTG...

LSE...

TTG

sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414612	ENSMUST00000137716	Pxn-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

831870

CTG...

LEL...

CTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829236	ENSMUST00000125054	Pxn-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

571371

255

GTG...

VPS...

GTG

InCDS
Overlapping
sORF

3T3, B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
570957	ENSMUST00000202564	Pxn-213	protein_coding	Ribo-seq		1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

518952

GTG...

VCA...

GTG

Intronic
sORF
ncRNA

BMDC, Liver, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

567268

ATG...

MAP...

ATG

ncRNA
sORF
Alternative
InCDS
Overlapping

3T3, Glioma, Liver,
MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse
2553	ENSMUST00000067268	Pxn-201	protein_coding	Ribo-seq	strong	1	Johnstone2016

65900

111

CTG...

LDA...

CTG

Alternative
Overlapping
sORF
Upstream
Intronic

R1E, Testis, 3T3,
B_cell, BMDC, E14,
Liver, MEF, Neutrophil,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2553	ENSMUST00000067268	Pxn-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		9	sORFs_org_Mouse

562107

159

CTG...

LSL...

CTG

ncRNA
sORF
Intronic

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
829236	ENSMUST00000125054	Pxn-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

565225

111

CTG...

LVK...

CTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

561491

171

CTG...

LSP...

CTG

Intronic
sORF
ncRNA

B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829236	ENSMUST00000125054	Pxn-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

902666

ACG...

TDS...

ACG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1236992

ACG...

TGS...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

569495

TTG...

LPK...

TTG

ncRNA
sORF
Alternative
InCDS
Overlapping

3T3, MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

559301

108

GTG...

VKE...

GTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

906260

ACG...

TAW...

ACG

Alternative
InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
906261	ENSMUST00000212819	Pxn-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse

169796

GTG...

VRP...

GTG

Intronic
sORF
ncRNA

Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

414576

AAG...

KLR...

AAG

Alternative
Overlapping
sORF
Upstream
Intronic

C2C12, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2553	ENSMUST00000067268	Pxn-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

570203

CTG...

LGA...

CTG

Alternative
InCDS
Overlapping
sORF
ncRNA

B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
560918	ENSMUST00000086523	Pxn-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse

831151

CTG...

LLL...

CTG

Intronic
sORF

B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829236	ENSMUST00000125054	Pxn-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

903983

144

ACG...

TGS...

ACG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

414611

264

TTG...

LES...

TTG

sORF
Intronic

C2C12, R1E, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414612	ENSMUST00000137716	Pxn-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

829843

171

CTG...

LTQ...

CTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829236	ENSMUST00000125054	Pxn-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

569646

TTG...

LLP...

TTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

565691

CTG...

LES...

CTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
67006	ENSMUST00000125007	Pxn-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

904179

AAG...

KGS...

AAG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

573583

213

TTG...

LED...

TTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573584	ENSMUST00000153682	Pxn-211	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

574420

219

CTG...

LAL...

CTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
573584	ENSMUST00000153682	Pxn-211	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

904403

ACG...

TRK...

ACG

Intronic
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
169797	ENSMUST00000152156	Pxn-210	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

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