Gene NCBI:13046 | MetamORF

Gene

ID CARD

NCBI:13046

Aliases

1600010O03Rik
AA407467, Brunol2, Celf1
CUG-BP, CUG-BP1, CUGBP
Cugbp1, D2Wsu101e, ENSMUSG00000005506
HNAB50, MGI:1342295, NAB50
NCBI:13046, OFF:Celf1

Chromosome

Transcripts

88 ORFs
14 known transcripts
244 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

412691

ENSMUST00000150546

Celf1-212

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
969643	108	ATT ...	IRP ...	Ribo-seq	ATT		1	sORFs_org_Mouse	ncRNA sORF	E14
412690	66	ATA ...	IFV ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	ncRNA sORF	C2C12
813807	57	CTG ...	LRQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	B_cell, E14
498116	60	GTG ...	VDQ ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
499090	183	TTG ...	LGC ...	Ribo-seq	TTG		3	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, Spleen_B_cell
811706	210	GTG ...	VVG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
498087	72	CTG ...	LCI ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
499563	120	CTG ...	LLW ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	B_cell, Spleen_B_cell
494024	168	CTG ...	LAA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, Spleen_B_cell
1208716	66	AGG ...	RQQ ...	Ribo-seq	AGG		1	sORFs_org_Mouse	ncRNA sORF	E14

1162777

ENSMUST00000127580

Celf1-210

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1211479	33	CTG ...	LRL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	ncRNA sORF	MEF
1165686	93	GTG ...	VGP ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	MEF, v6-5
498087	72	CTG ...	LCI ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	v6-5
1168078	30	GTG ...	VQQ ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	MEF, v6-5
982598	45	TTG ...	LWI ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	ncRNA sORF	v6-5
98059	36	GTG ...	VDH ...	Ribo-seq	GTG		5	sORFs_org_Mouse	ncRNA sORF	E14, MEF, NSC, R1E, v6-5
498116	60	GTG ...	VDQ ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	v6-5
112335	60	TTG ...	LDF ...	Ribo-seq	TTG		4	sORFs_org_Mouse	ncRNA sORF	MEF, NSC, R1E, v6-5

122301

ENSMUST00000068747

Celf1-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
100668	30	CTG ...	LPP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14
100885	45	ATG ...	MIV ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	E14
46483	42	ATG ...	MTI ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
97408	75	ATG ...	MTS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
111688	33	CTG ...	LWK ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
100014	69	TTG ...	LET ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
807768	33	ATG ...	MQC ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
95810	114	GTG ...	VAF ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1211730	48	ATT ...	IDT ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1211486	108	AAG ...	KEP ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
1214025	75	AGG ...	RSL ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
122300	84	CTG ...	LRQ ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Overlapping sORF Upstream	BMDC, Brain, E14, MEF
1213755	93	ACG ...	TAP ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1215016	246	ATA ...	ICC ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
44738	36	GTG ...	VQR ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1215541	93	AGG ...	RQQ ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Overlapping sORF Upstream	E14
105423	132	ATG ...	MVV ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1210821	279	TTG ...	LLI ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
970576	135	ATT ...	IRP ...	Ribo-seq	ATT		2	sORFs_org_Mouse	Overlapping sORF Upstream	BMDC, E14
105111	33	TTG ...	LGM ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
1212519	63	ATT ...	ILV ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1210129	87	ATC ...	ITC ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
966255	63	ATC ...	ILM ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1217264	63	ATC ...	IQQ ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1210638	75	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
112088	96	CTG ...	LGV ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1207611	60	AGG ...	RTY ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
1212561	39	ATC ...	IQQ ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
108574	48	TTG ...	LDR ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1217406	204	ATT ...	IDT ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1213260	90	ATA ...	ICC ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
46396	108	TTG ...	LPT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
46515	42	TTG ...	LWA ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1210724	36	ATC ...	ILS ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14

1206410

ENSMUST00000133657

Celf1-211

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1213209	75	AAG ...	KLC ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	ncRNA sORF	E14
1214234	63	AAG ...	KLD ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	E14
1211479	33	CTG ...	LRL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	ncRNA sORF	E14
1168078	30	GTG ...	VQQ ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	ncRNA sORF	E14
498116	60	GTG ...	VDQ ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	E14
412690	66	ATA ...	IFV ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	ncRNA sORF	E14
1210292	81	AAG ...	KLK ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	ncRNA sORF	E14

500275

ENSMUST00000111452

Celf1-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
46396	108	TTG ...	LPT ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, v6-5
120453	75	TTG ...	LLF ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, Spleen_B_cell, v6-5
100668	30	CTG ...	LPP ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, v6-5
730394	33	TTG ...	LLH ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
105907	45	ATG ...	MLL ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, v6-5
808429	123	TTG ...	LCI ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC
44738	36	GTG ...	VQR ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
114582	129	GTG ...	VVW ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, v6-5
496497	60	TTG ...	LML ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
97408	75	ATG ...	MTS ...	Ribo-seq	ATG	moderate	6	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, NSC, v6-5
496079	33	CTG ...	LSQ ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, NSC, v6-5
95810	114	GTG ...	VAF ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, v6-5
1211479	33	CTG ...	LRL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
100885	45	ATG ...	MIV ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	MEF
105553	102	ATG ...	MAL ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, v6-5
105423	132	ATG ...	MVV ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, v6-5
982598	45	TTG ...	LWI ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative sORF Upstream	Liver
807768	33	ATG ...	MQC ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF
46515	42	TTG ...	LWA ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	Liver, MEF
105501	39	CTG ...	LQP ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, v6-5
105111	33	TTG ...	LGM ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Liver, MEF, v6-5
497858	57	ATG ...	MLS ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	Liver, MEF
108574	48	TTG ...	LDR ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
46483	42	ATG ...	MTI ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, v6-5
112088	96	CTG ...	LGV ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, v6-5
495998	39	TTG ...	LSS ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
116742	42	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, v6-5
109879	60	CTG ...	LVS ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, v6-5
100014	69	TTG ...	LET ...	Ribo-seq	TTG	strong	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Liver, MEF, v6-5
111688	33	CTG ...	LWK ...	Ribo-seq	CTG	moderate	6	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, v6-5
48018	81	CTG ...	LKM ...	Ribo-seq	CTG	moderate	7	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC, v6-5
103432	39	TTG ...	LKS ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, Neutrophil, v6-5

109880

ENSMUST00000005643

Celf1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
730394	33	TTG ...	LLH ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
108574	48	TTG ...	LDR ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
97408	75	ATG ...	MTS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
813807	57	CTG ...	LRQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	BMDC
114582	129	GTG ...	VVW ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
109879	60	CTG ...	LVS ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
100014	69	TTG ...	LET ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
969643	108	ATT ...	IRP ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative sORF Upstream	BMDC
103432	39	TTG ...	LKS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
48018	81	CTG ...	LKM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
111688	33	CTG ...	LWK ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
120453	75	TTG ...	LLF ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Liver, R1E

807522

ENSMUST00000111451

Celf1-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
97408	75	ATG ...	MTS ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	B_cell, Brain, Glioma, Liver, MEF, MESC
742688	210	TTG ...	LGC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell
100668	30	CTG ...	LPP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Liver
46515	42	TTG ...	LWA ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain
111688	33	CTG ...	LWK ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
808429	123	TTG ...	LCI ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain
112088	96	CTG ...	LGV ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
46483	42	ATG ...	MTI ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Brain, Glioma, Liver, MEF, MESC
105423	132	ATG ...	MVV ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Brain, Glioma, Liver, MEF, MESC
44738	36	GTG ...	VQR ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain
730394	33	TTG ...	LLH ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
807768	33	ATG ...	MQC ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	B_cell, Brain, Glioma, Liver, MEF, MESC
109879	60	CTG ...	LVS ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
116742	42	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
105501	39	CTG ...	LQP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
46396	108	TTG ...	LPT ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain
48018	81	CTG ...	LKM ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain
95810	114	GTG ...	VAF ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
105907	45	ATG ...	MLL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
495998	39	TTG ...	LSS ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain
105111	33	TTG ...	LGM ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
744568	237	GTG ...	VVG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell
496079	33	CTG ...	LSQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
105553	102	ATG ...	MAL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
108574	48	TTG ...	LDR ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
100014	69	TTG ...	LET ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Brain
497858	57	ATG ...	MLS ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	B_cell, Brain, Glioma, Liver, MEF, MESC
122300	84	CTG ...	LRQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell, Brain
746764	195	CTG ...	LAA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell, Brain, E14
114582	129	GTG ...	VVW ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
496497	60	TTG ...	LML ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain
100885	45	ATG ...	MIV ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative Downstream Overlapping sORF	B_cell, Glioma, Liver, MEF, MESC
733562	30	GTG ...	VLF ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
499177	30	ATG ...	MVL ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	B_cell, Brain, Glioma, Liver, MEF, MESC

95811

ENSMUST00000111448

Celf1-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
100885	45	ATG ...	MIV ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain, R1E
95810	114	GTG ...	VAF ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
111688	33	CTG ...	LWK ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
733562	30	GTG ...	VLF ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
46483	42	ATG ...	MTI ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
730394	33	TTG ...	LLH ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
105907	45	ATG ...	MLL ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
496079	33	CTG ...	LSQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
496497	60	TTG ...	LML ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
46515	42	TTG ...	LWA ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
499177	30	ATG ...	MVL ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
103432	39	TTG ...	LKS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
114582	129	GTG ...	VVW ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
100014	69	TTG ...	LET ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
108574	48	TTG ...	LDR ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
105553	102	ATG ...	MAL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
116742	42	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
109879	60	CTG ...	LVS ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
100668	30	CTG ...	LPP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
105501	39	CTG ...	LQP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
97408	75	ATG ...	MTS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
112088	96	CTG ...	LGV ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
495998	39	TTG ...	LSS ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
105423	132	ATG ...	MVV ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
46396	108	TTG ...	LPT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
497858	57	ATG ...	MLS ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
48018	81	CTG ...	LKM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain

105502

ENSMUST00000111455

Celf1-208

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
44738	36	GTG ...	VQR ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
120453	75	TTG ...	LLF ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF
105553	102	ATG ...	MAL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
116742	42	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
105501	39	CTG ...	LQP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
100014	69	TTG ...	LET ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
46396	108	TTG ...	LPT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain

98060

ENSMUST00000154442

Celf1-213

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
110124	57	ATG ...	MQL ...	Ribo-seq	ATG		7	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, NSC, v6-5
112335	60	TTG ...	LDF ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
499177	30	ATG ...	MVL ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	ncRNA sORF	E14, MEF
1501625	147	TTG ...	LRE ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	NSC
1418658	183	GTG ...	VGQ ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	Liver, NSC
495998	39	TTG ...	LSS ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	ncRNA sORF	MEF, v6-5
111666	228	CTG ...	LDH ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	Brain, Liver, MEF, NSC
98059	36	GTG ...	VDH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
1161786	54	TTG ...	LFI ...	Ribo-seq	TTG		3	sORFs_org_Mouse	ncRNA sORF	E14, MEF, v6-5

729018

ENSMUST00000068726

Celf1-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
44738	36	GTG ...	VQR ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
103432	39	TTG ...	LKS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
108574	48	TTG ...	LDR ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF
733562	30	GTG ...	VLF ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
744568	237	GTG ...	VVG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Overlapping sORF Upstream	3T3
97408	75	ATG ...	MTS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
122300	84	CTG ...	LRQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Overlapping sORF Upstream	3T3, MEF
496079	33	CTG ...	LSQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
740171	141	GTG ...	VPP ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	3T3
733249	150	GTG ...	VPE ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative sORF Upstream	3T3
499177	30	ATG ...	MVL ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
105111	33	TTG ...	LGM ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
100668	30	CTG ...	LPP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
495998	39	TTG ...	LSS ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
746764	195	CTG ...	LAA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Overlapping sORF Upstream	3T3
46396	108	TTG ...	LPT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
499563	120	CTG ...	LLW ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	3T3
742688	210	TTG ...	LGC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Overlapping sORF Upstream	3T3
48018	81	CTG ...	LKM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3

44739

ENSMUST00000177642

Celf1-214

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
499177	30	ATG ...	MVL ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
500579	51	CTG ...	LRQ ...	Ribo-seq	CTG		3	sORFs_org_Mouse	sORF Upstream	MEF, Neutrophil, Spleen_B_cell
496497	60	TTG ...	LML ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
105111	33	TTG ...	LGM ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
95810	114	GTG ...	VAF ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
100885	45	ATG ...	MIV ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Spleen_B_cell
100014	69	TTG ...	LET ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, Spleen_B_cell
103432	39	TTG ...	LKS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
46515	42	TTG ...	LWA ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell, Testis
108574	48	TTG ...	LDR ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
46483	42	ATG ...	MTI ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell, Testis
116742	42	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
48018	81	CTG ...	LKM ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell, Testis
501413	162	CTG ...	LAA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF Upstream	R1E, Spleen_B_cell
97408	75	ATG ...	MTS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
105553	102	ATG ...	MAL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
109879	60	CTG ...	LVS ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
502315	177	TTG ...	LGC ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF Upstream	R1E, Spleen_B_cell
112088	96	CTG ...	LGV ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
497858	57	ATG ...	MLS ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
46396	108	TTG ...	LPT ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell, Testis
114582	129	GTG ...	VVW ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
105423	132	ATG ...	MVV ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
44738	36	GTG ...	VQR ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Testis
495998	39	TTG ...	LSS ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
499776	30	GTG ...	VQP ...	Ribo-seq	GTG		5	sORFs_org_Mouse	sORF Upstream	MEF, Neutrophil, R1E, Spleen_B_cell, v6-5
496079	33	CTG ...	LSQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
111688	33	CTG ...	LWK ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell

95767

ENSMUST00000127385

Celf1-209

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
95766	120	TTG ...	LKV ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	ncRNA sORF	Brain
97901	42	GTG ...	VQL ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	3T3, Brain
105111	33	TTG ...	LGM ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Brain
46483	42	ATG ...	MTI ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	ncRNA sORF	3T3
100014	69	TTG ...	LET ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	ncRNA sORF	3T3
95783	108	CTG ...	LQM ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Brain

860522

ENSMUST00000111449

Celf1-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
46515	42	TTG ...	LWA ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
966255	63	ATC ...	ILM ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
100014	69	TTG ...	LET ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
100668	30	CTG ...	LPP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Liver
97408	75	ATG ...	MTS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
730394	33	TTG ...	LLH ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
495998	39	TTG ...	LSS ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
497858	57	ATG ...	MLS ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
100885	45	ATG ...	MIV ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC
46396	108	TTG ...	LPT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
968684	42	ATA ...	IVS ...	Ribo-seq	ATA	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC

3068731

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
105423	132	ATG ...	MVV ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

88 ORFs
14 known transcripts
244 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

969643

108

ATT...

IRP...

ATT

ncRNA
sORF
Alternative
Upstream

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
412691	ENSMUST00000150546	Celf1-212	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
109880	ENSMUST00000005643	Celf1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1211479

CTG...

LRL...

CTG

ncRNA
sORF
Alternative
InCDS
Overlapping

MEF, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1162777	ENSMUST00000127580	Celf1-210	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
1206410	ENSMUST00000133657	Celf1-211	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

100668

CTG...

LPP...

CTG

InCDS
Overlapping
sORF
Alternative

BMDC, E14, MEF,
v6-5, Brain, Liver,
3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
860522	ENSMUST00000111449	Celf1-205	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

1213209

AAG...

KLC...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1206410	ENSMUST00000133657	Celf1-211	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

46396

108

TTG...

LPT...

TTG

InCDS
Overlapping
sORF
Alternative

E14, MEF, v6-5,
B_cell, Brain, Spleen_B_cell,
Testis, 3T3, Liver,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
105502	ENSMUST00000111455	Celf1-208	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
860522	ENSMUST00000111449	Celf1-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

100885

ATG...

MIV...

ATG

Alternative
Downstream
Overlapping
sORF

E14, Brain, R1E,
Spleen_B_cell, MEF, BMDC,
B_cell, Glioma, Liver,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
860522	ENSMUST00000111449	Celf1-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016

730394

TTG...

LLH...

TTG

InCDS
Overlapping
sORF
Alternative

3T3, MEF, R1E,
Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
109880	ENSMUST00000005643	Celf1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
860522	ENSMUST00000111449	Celf1-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

97408

ATG...

MTS...

ATG

Alternative
InCDS
Overlapping
sORF

B_cell, Brain, Glioma,
Liver, MEF, MESC,
E14, NSC, v6-5,
3T3, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse Johnstone2016
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
109880	ENSMUST00000005643	Celf1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
860522	ENSMUST00000111449	Celf1-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

120453

TTG...

LLF...

TTG

Alternative
InCDS
Overlapping
sORF

E14, MEF, Spleen_B_cell,
v6-5, Brain, 3T3,
B_cell, Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq		6	sORFs_org_Mouse
105502	ENSMUST00000111455	Celf1-208	protein_coding	Ribo-seq		3	sORFs_org_Mouse
109880	ENSMUST00000005643	Celf1-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

46483

ATG...

MTI...

ATG

Alternative
InCDS
Overlapping
sORF
ncRNA

E14, R1E, Brain,
Glioma, Liver, MEF,
MESC, Spleen_B_cell, Testis,
3T3, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
95767	ENSMUST00000127385	Celf1-209	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse

44738

GTG...

VQR...

GTG

InCDS
Overlapping
sORF
Alternative

Brain, 3T3, MEF,
v6-5, E14, B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
105502	ENSMUST00000111455	Celf1-208	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

95810

114

GTG...

VAF...

GTG

Alternative
InCDS
Overlapping
sORF

Brain, R1E, E14,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

110124

ATG...

MQL...

ATG

ncRNA
sORF

Brain, E14, Liver,
MEF, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
98060	ENSMUST00000154442	Celf1-213	processed_transcript	Ribo-seq		7	sORFs_org_Mouse

112335

TTG...

LDF...

TTG

ncRNA
sORF

Brain, Liver, MEF,
NSC, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
98060	ENSMUST00000154442	Celf1-213	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
1162777	ENSMUST00000127580	Celf1-210	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

499177

ATG...

MVL...

ATG

Alternative
InCDS
Overlapping
sORF
ncRNA

Spleen_B_cell, E14, MEF,
R1E, 3T3, B_cell,
Brain, Glioma, Liver,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
98060	ENSMUST00000154442	Celf1-213	processed_transcript	Ribo-seq	strong	2	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse Johnstone2016

1214234

AAG...

KLD...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1206410	ENSMUST00000133657	Celf1-211	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

111688

CTG...

LWK...

CTG

Alternative
InCDS
Overlapping
sORF

E14, Brain, R1E,
Spleen_B_cell, MEF, v6-5,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
109880	ENSMUST00000005643	Celf1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

100014

TTG...

LET...

TTG

InCDS
Overlapping
sORF
Alternative
ncRNA

E14, MEF, Spleen_B_cell,
Liver, R1E, Brain,
B_cell, 3T3, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
860522	ENSMUST00000111449	Celf1-205	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
109880	ENSMUST00000005643	Celf1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
105502	ENSMUST00000111455	Celf1-208	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
95767	ENSMUST00000127385	Celf1-209	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse

103432

TTG...

LKS...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, Spleen_B_cell, Brain,
R1E, MEF, Neutrophil,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
109880	ENSMUST00000005643	Celf1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse

105907

ATG...

MLL...

ATG

InCDS
Overlapping
sORF
Alternative

E14, MEF, v6-5,
Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

742688

210

TTG...

LGC...

TTG

Overlapping
sORF
Upstream

B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

807768

ATG...

MQC...

ATG

InCDS
Overlapping
sORF
Alternative

E14, B_cell, Brain,
Glioma, Liver, MEF,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse Johnstone2016
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

733562

GTG...

VLF...

GTG

Alternative
InCDS
Overlapping
sORF

R1E, 3T3, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1211730

ATT...

IDT...

ATT

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

412690

ATA...

IFV...

ATA

ncRNA
sORF

C2C12, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
412691	ENSMUST00000150546	Celf1-212	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
1206410	ENSMUST00000133657	Celf1-211	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

808429

123

TTG...

LCI...

TTG

Alternative
InCDS
Overlapping
sORF

E14, MEF, NSC,
B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse

500579

CTG...

LRQ...

CTG

sORF
Upstream

MEF, Neutrophil, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1211486

108

AAG...

KEP...

AAG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1165686

GTG...

VGP...

GTG

ncRNA
sORF

MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1162777	ENSMUST00000127580	Celf1-210	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

108574

TTG...

LDR...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, MEF, R1E,
Spleen_B_cell, Brain, E14,
v6-5, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
109880	ENSMUST00000005643	Celf1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1214025

AGG...

RSL...

AGG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

95766

120

TTG...

LKV...

TTG

ncRNA
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95767	ENSMUST00000127385	Celf1-209	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

122300

CTG...

LRQ...

CTG

Overlapping
sORF
Upstream

BMDC, Brain, E14,
MEF, 3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq		4	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse

813807

CTG...

LRQ...

CTG

ncRNA
sORF
Alternative
Upstream

B_cell, E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
412691	ENSMUST00000150546	Celf1-212	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
109880	ENSMUST00000005643	Celf1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1213755

ACG...

TAP...

ACG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

498116

GTG...

VDQ...

GTG

ncRNA
sORF

Spleen_B_cell, E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
412691	ENSMUST00000150546	Celf1-212	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
1206410	ENSMUST00000133657	Celf1-211	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
1162777	ENSMUST00000127580	Celf1-210	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

46515

TTG...

LWA...

TTG

Alternative
InCDS
Overlapping
sORF

B_cell, Brain, BMDC,
Spleen_B_cell, Testis, R1E,
Liver, MEF, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
860522	ENSMUST00000111449	Celf1-205	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

496497

TTG...

LML...

TTG

Alternative
InCDS
Overlapping
sORF

Spleen_B_cell, MEF, R1E,
B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

1215016

246

ATA...

ICC...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

744568

237

GTG...

VVG...

GTG

Overlapping
sORF
Upstream

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

114582

129

GTG...

VVW...

GTG

InCDS
Overlapping
sORF
Alternative

E14, v6-5, Brain,
Spleen_B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
109880	ENSMUST00000005643	Celf1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

496079

CTG...

LSQ...

CTG

Alternative
InCDS
Overlapping
sORF

E14, NSC, v6-5,
R1E, 3T3, Brain,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1215541

AGG...

RQQ...

AGG

Overlapping
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

105111

TTG...

LGM...

TTG

InCDS
Overlapping
sORF
ncRNA
Alternative

Spleen_B_cell, Brain, E14,
3T3, Liver, MEF,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95767	ENSMUST00000127385	Celf1-209	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse

97901

GTG...

VQL...

GTG

ncRNA
sORF

3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95767	ENSMUST00000127385	Celf1-209	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse

112088

CTG...

LGV...

CTG

Alternative
InCDS
Overlapping
sORF

Brain, E14, Spleen_B_cell,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

105423

132

ATG...

MVV...

ATG

Alternative
InCDS
Overlapping
sORF

E14, Brain, Glioma,
Liver, MEF, MESC,
v6-5, Spleen_B_cell,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
3068731	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

1210821

279

TTG...

LLI...

TTG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

970576

135

ATT...

IRP...

ATT

Overlapping
sORF
Upstream

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

499090

183

TTG...

LGC...

TTG

ncRNA
sORF

B_cell, E14, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
412691	ENSMUST00000150546	Celf1-212	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

966255

ATC...

ILM...

ATC

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
860522	ENSMUST00000111449	Celf1-205	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

105553

102

ATG...

MAL...

ATG

InCDS
Overlapping
sORF
Alternative

Brain, E14, v6-5,
Spleen_B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
105502	ENSMUST00000111455	Celf1-208	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1501625

147

TTG...

LRE...

TTG

ncRNA
sORF

NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
98060	ENSMUST00000154442	Celf1-213	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1212519

ATT...

ILV...

ATT

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

811706

210

GTG...

VVG...

GTG

ncRNA
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
412691	ENSMUST00000150546	Celf1-212	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1210129

ATC...

ITC...

ATC

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

498087

CTG...

LCI...

CTG

ncRNA
sORF

Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
412691	ENSMUST00000150546	Celf1-212	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
1162777	ENSMUST00000127580	Celf1-210	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

116742

CTG...

LLQ...

CTG

Alternative
InCDS
Overlapping
sORF

Spleen_B_cell, Brain, R1E,
E14, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
105502	ENSMUST00000111455	Celf1-208	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

1217264

ATC...

IQQ...

ATC

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1168078

GTG...

VQQ...

GTG

ncRNA
sORF

E14, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1206410	ENSMUST00000133657	Celf1-211	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
1162777	ENSMUST00000127580	Celf1-210	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

1418658

183

GTG...

VGQ...

GTG

ncRNA
sORF

Liver, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
98060	ENSMUST00000154442	Celf1-213	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

48018

CTG...

LKM...

CTG

Alternative
InCDS
Overlapping
sORF

Spleen_B_cell, Testis, B_cell,
Brain, R1E, 3T3,
E14, MEF, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
109880	ENSMUST00000005643	Celf1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	moderate	7	sORFs_org_Mouse

501413

162

CTG...

LAA...

CTG

sORF
Upstream

R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq		2	sORFs_org_Mouse

499563

120

CTG...

LLW...

CTG

ncRNA
sORF
Alternative
Upstream

B_cell, Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
412691	ENSMUST00000150546	Celf1-212	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1210638

GTG...

VLL...

GTG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

109879

CTG...

LVS...

CTG

Alternative
InCDS
Overlapping
sORF

Brain, Spleen_B_cell, R1E,
E14, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
109880	ENSMUST00000005643	Celf1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

982598

TTG...

LWI...

TTG

Alternative
sORF
Upstream
ncRNA

Liver, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1162777	ENSMUST00000127580	Celf1-210	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

740171

141

GTG...

VPP...

GTG

Alternative
sORF
Upstream

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

105501

CTG...

LQP...

CTG

Alternative
InCDS
Overlapping
sORF

Brain, E14, MEF,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
105502	ENSMUST00000111455	Celf1-208	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

733249

150

GTG...

VPE...

GTG

Alternative
sORF
Upstream

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

502315

177

TTG...

LGC...

TTG

sORF
Upstream

R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq		2	sORFs_org_Mouse

497858

ATG...

MLS...

ATG

Alternative
InCDS
Overlapping
sORF

Spleen_B_cell, Liver, MEF,
BMDC, B_cell, Brain,
Glioma, MESC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
860522	ENSMUST00000111449	Celf1-205	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse Johnstone2016
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1207611

AGG...

RTY...

AGG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

495998

TTG...

LSS...

TTG

ncRNA
sORF
Alternative
InCDS
Overlapping

MEF, v6-5, B_cell,
Brain, Spleen_B_cell, Liver,
3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
98060	ENSMUST00000154442	Celf1-213	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
860522	ENSMUST00000111449	Celf1-205	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
500275	ENSMUST00000111452	Celf1-207	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
95811	ENSMUST00000111448	Celf1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1212561

ATC...

IQQ...

ATC

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

746764

195

CTG...

LAA...

CTG

Overlapping
sORF
Upstream

3T3, B_cell, Brain,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
729018	ENSMUST00000068726	Celf1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
807522	ENSMUST00000111451	Celf1-206	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1217406

204

ATT...

IDT...

ATT

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

98059

GTG...

VDH...

GTG

ncRNA
sORF

E14, MEF, NSC,
R1E, v6-5, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1162777	ENSMUST00000127580	Celf1-210	processed_transcript	Ribo-seq		5	sORFs_org_Mouse
98060	ENSMUST00000154442	Celf1-213	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1213260

ATA...

ICC...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

95783

108

CTG...

LQM...

CTG

ncRNA
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95767	ENSMUST00000127385	Celf1-209	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

499776

GTG...

VQP...

GTG

sORF
Upstream

MEF, Neutrophil, R1E,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44739	ENSMUST00000177642	Celf1-214	protein_coding	Ribo-seq		5	sORFs_org_Mouse

111666

228

CTG...

LDH...

CTG

ncRNA
sORF

Brain, Liver, MEF,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
98060	ENSMUST00000154442	Celf1-213	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

494024

168

CTG...

LAA...

CTG

ncRNA
sORF

B_cell, E14, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
412691	ENSMUST00000150546	Celf1-212	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

1210292

AAG...

KLK...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1206410	ENSMUST00000133657	Celf1-211	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

1208716

AGG...

RQQ...

AGG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
412691	ENSMUST00000150546	Celf1-212	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1161786

TTG...

LFI...

TTG

ncRNA
sORF

E14, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
98060	ENSMUST00000154442	Celf1-213	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

968684

ATA...

IVS...

ATA

Alternative
Downstream
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
860522	ENSMUST00000111449	Celf1-205	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

1210724

ATC...

ILS...

ATC

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
122301	ENSMUST00000068747	Celf1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

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