Gene NCBI:11974 | MetamORF

Gene

ID CARD

NCBI:11974

Aliases

Atp6k
Atp6v0e, Atp6v0e1, ENSMUSG00000015575
M9.2, MGI:1328318, NCBI:11974
OFF:Atp6v0e

Chromosome

Transcripts

17 ORFs
2 known transcripts
27 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

12835

ENSMUST00000015719

Atp6v0e-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
955548	93	ATA ...	IPR ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
480519	147	GTG ...	VGR ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Liver, MEF, NSC, Spleen_B_cell
12834	60	TTG ...	LAD ...	Ribo-seq	TTG	moderate	13	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Skin_tumor, Testis, v6-5
478682	51	CTG ...	LGL ...	Ribo-seq	CTG	strong	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, Liver, NSC, R1E
13245	72	CTG ...	LLS ...	Ribo-seq	CTG		14	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Skin_tumor, Testis, v6-5
38481	114	CTG ...	LLG ...	Ribo-seq	CTG	weak	9	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis
382001	63	CTG ...	LVS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain, NSC
1005077	51	TTG ...	LLL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
478457	111	CTG ...	LGR ...	Ribo-seq	CTG	moderate	9	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
13176	75	TTG ...	LLL ...	Ribo-seq	TTG		14	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Skin_tumor, Spleen_B_cell, Testis, v6-5
13222	84	TTG ...	LFS ...	Ribo-seq	TTG		15	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Skin_tumor, Spleen_B_cell, Testis, v6-5
956207	48	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
706907	96	CTG ...	LLT ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, MEF
13140	45	TTG ...	LQF ...	Ribo-seq	TTG	weak	10	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, Neutrophil, NSC, R1E, Skin_tumor, Testis, v6-5
955177	60	TTG ...	LFS ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF
954790	75	ACG ...	TRA ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC

478683

ENSMUST00000167352

Atp6v0e-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
955548	93	ATA ...	IPR ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
480519	147	GTG ...	VGR ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, Brain, E14
13222	84	TTG ...	LFS ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF
38481	114	CTG ...	LLG ...	Ribo-seq	CTG	weak	5	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, BMDC, Brain, E14
13245	72	CTG ...	LLS ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF, Spleen_B_cell
12834	60	TTG ...	LAD ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF, Spleen_B_cell
13140	45	TTG ...	LQF ...	Ribo-seq	TTG	weak	7	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, Liver, MEF, Spleen_B_cell
478457	111	CTG ...	LGR ...	Ribo-seq	CTG	moderate	6	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, BMDC, Brain, E14, Liver
13176	75	TTG ...	LLL ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF
703823	93	TTG ...	LTL ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, MEF
478682	51	CTG ...	LGL ...	Ribo-seq	CTG	strong	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, E14, Liver, Spleen_B_cell

ORFs

17 ORFs
2 known transcripts
27 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

955548

ATA...

IPR...

ATA

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
478683	ENSMUST00000167352	Atp6v0e-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

480519

147

GTG...

VGR...

GTG

Alternative
Overlapping
sORF
Upstream

Liver, MEF, NSC,
Spleen_B_cell, 3T3, B_cell,
Brain, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
478683	ENSMUST00000167352	Atp6v0e-202	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

12834

TTG...

LAD...

TTG

Alternative
InCDS
Overlapping
sORF

Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Skin_tumor, Testis,
v6-5, 3T3, B_cell,
BMDC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq	moderate	13	sORFs_org_Mouse
478683	ENSMUST00000167352	Atp6v0e-202	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse

478682

CTG...

LGL...

CTG

Alternative
InCDS
Overlapping
sORF

BMDC, Brain, Liver,
NSC, R1E, E14,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse
478683	ENSMUST00000167352	Atp6v0e-202	protein_coding	Ribo-seq	strong	6	sORFs_org_Mouse

13245

CTG...

LLS...

CTG

Alternative
InCDS
Overlapping
sORF

BMDC, Brain, E14,
Liver, MEF, Neutrophil,
NSC, R1E, Skin_tumor,
Testis, v6-5, 3T3,
B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq		14	sORFs_org_Mouse
478683	ENSMUST00000167352	Atp6v0e-202	protein_coding	Ribo-seq		6	sORFs_org_Mouse

38481

114

CTG...

LLG...

CTG

Alternative
Overlapping
sORF
Upstream

Brain, Liver, MEF,
Neutrophil, NSC, R1E,
Spleen_B_cell, Testis, 3T3,
B_cell, BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq	weak	9	sORFs_org_Mouse
478683	ENSMUST00000167352	Atp6v0e-202	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse

382001

CTG...

LVS...

CTG

Alternative
Downstream
Overlapping
sORF

Brain, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

1005077

TTG...

LLL...

TTG

Alternative
InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

478457

111

CTG...

LGR...

CTG

Alternative
Overlapping
sORF
Upstream

Brain, Liver, MEF,
Neutrophil, NSC, R1E,
Spleen_B_cell, v6-5, 3T3,
B_cell, BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq	moderate	9	sORFs_org_Mouse
478683	ENSMUST00000167352	Atp6v0e-202	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse

13222

TTG...

LFS...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, MEF, E14,
Liver, Neutrophil, NSC,
R1E, Skin_tumor, Spleen_B_cell,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478683	ENSMUST00000167352	Atp6v0e-202	protein_coding	Ribo-seq		5	sORFs_org_Mouse
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq		15	sORFs_org_Mouse

13176

TTG...

LLL...

TTG

Alternative
InCDS
Overlapping
sORF

Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Skin_tumor, Spleen_B_cell,
Testis, v6-5, 3T3,
B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq		14	sORFs_org_Mouse
478683	ENSMUST00000167352	Atp6v0e-202	protein_coding	Ribo-seq		5	sORFs_org_Mouse

956207

CTG...

LLS...

CTG

Alternative
InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

706907

CTG...

LLT...

CTG

Alternative
Overlapping
sORF
Upstream

3T3, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

13140

TTG...

LQF...

TTG

InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, Liver, MEF,
Spleen_B_cell, E14, Neutrophil,
NSC, R1E, Skin_tumor,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478683	ENSMUST00000167352	Atp6v0e-202	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq	weak	10	sORFs_org_Mouse

955177

TTG...

LFS...

TTG

Alternative
InCDS
Overlapping
sORF

BMDC, Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

954790

ACG...

TRA...

ACG

Alternative
Overlapping
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12835	ENSMUST00000015719	Atp6v0e-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

703823

TTG...

LTL...

TTG

Alternative
Overlapping
sORF
Upstream

3T3, B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478683	ENSMUST00000167352	Atp6v0e-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

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