Metam
ORF

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Gene

Gene

ID CARD

ID

NCBI:11749

Aliases

Anx6
Anxa6, AnxVI, AW107198
Cabm, Camb, ENSMUSG00000018340
MGI:88255, NCBI:11749, OFF:Anxa6

Chromosome

11

Transcripts

85 ORFs
3 known transcripts
137 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

298500 ENSMUST00000108883 Anxa6-202 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

305708 63

CTG ...

LTS ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, BMDC, Brain,
R1E
317561 99

CTG ...

LMK ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
1602162 69

TTG ...

LWP ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
MEF
455467 273

ATG ...

MPC ...

Ribo-seq
ATG

7 sORFs_org_Mouse
    CDS
    sORF
3T3, BMDC, E14,
MEF, Spleen_B_cell, v6-5
319246 54

ATG ...

MTS ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
315857 63

TTG ...

LRN ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
457415 231

GTG ...

VTP ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, MEF
1603573 90

CTG ...

LGM ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
MEF
648149 57

GTG ...

VQP ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3
457459 219

ATG ...

MSL ...

Ribo-seq
ATG

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, BMDC, E14,
MEF
303943 45

TTG ...

LPI ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, R1E
303625 33

ATG ...

MTS ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, BMDC, MEF,
v6-5
303569 81

ATG ...

MSE ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, BMDC, R1E
454457 87

CTG ...

LTS ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
MEF
455075 147

TTG ...

LGN ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
MEF, Spleen_B_cell
318316 114

TTG ...

LVT ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14, MEF
1129824 192

CTG ...

LTS ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14, MEF, v6-5
307641 54

TTG ...

LET ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, BMDC
456155 195

TTG ...

LAQ ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
MEF
306274 42

CTG ...

LAT ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
308378 81

GTG ...

VPC ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3
646741 63

CTG ...

LST ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3
307147 93

ATG ...

MKP ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, BMDC
891924 105

TTG ...

LEL ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
315813 111

GTG ...

VTQ ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14, MEF, R1E
1704588 162

CTG ...

LDL ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
MEF
654716 117

CTG ...

LAT ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, MEF
313192 120

GTG ...

VAL ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14, MEF
1704956 156

CTG ...

LKV ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
MEF
298499 36

GTG ...

VTP ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, Brain
1342508 204

GTG ...

VTL ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14, MEF
644360 63

CTG ...

LCV ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3
456444 228

CTG ...

LPY ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, BMDC, E14,
MEF
456927 78

CTG ...

LAS ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3
454710 147

ATG ...

MSR ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
MEF
457313 186

ATG ...

MRS ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, MEF
303419 96

CTG ...

LMK ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3
296944 42

TTG ...

LRN ...

Ribo-seq
TTG

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, BMDC, MEF,
v6-5
456610 105

ATG ...

MSE ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
MEF, Spleen_B_cell
457073 123

ATG ...

MFL ...

Ribo-seq
ATG

7 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, BMDC, MEF,
Spleen_B_cell, v6-5
1604069 84

ATG ...

MSR ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
MEF
1596097 51

GTG ...

VSR ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
MEF
891159 96

ATG ...

MKP ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
454433 240

TTG ...

LPI ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3
457274 171

TTG ...

LKF ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, MEF, Spleen_B_cell
658981 111

ATG ...

MSS ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, MEF, v6-5
19604 ENSMUST00000148298 Anxa6-203 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

308378 81

GTG ...

VPC ...

Ribo-seq
GTG

moderate

6 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF, v6-5
1340958 72

GTG ...

VAY ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF
303419 96

CTG ...

LMK ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF
307641 54

TTG ...

LET ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    ncRNA
    sORF
MEF, Spleen_B_cell
303569 81

ATG ...

MSE ...

Ribo-seq
ATG

6 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF, Spleen_B_cell,
v6-5
1122152 69

TTG ...

LFQ ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
MEF, v6-5
448461 30

CTG ...

LKL ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF, Spleen_B_cell,
v6-5
450705 33

CTG ...

LLK ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    ncRNA
    sORF
MEF, Spleen_B_cell, v6-5
1599899 138

CTG ...

LSQ ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    ncRNA
    sORF
MEF
453496 87

ATG ...

MPS ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF, Spleen_B_cell
1038998 288

CTG ...

LAT ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
Neutrophil, R1E
1339219 96

CTG ...

LSL ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF
1291197 45

AAG ...

KPV ...

Ribo-seq
AAG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
773040 30

CTG ...

LQN ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
1696735 132

CTG ...

LKV ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
MEF
1340416 117

GTG ...

VAL ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF
1129404 96

CTG ...

LAT ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
v6-5
307147 93

ATG ...

MKP ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF
1696444 138

CTG ...

LDL ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
MEF
1696543 36

ATG ...

MIL ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
    ncRNA
    sORF
MEF
452917 99

ATG ...

MFL ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    ncRNA
    sORF
MEF, Spleen_B_cell
1695748 75

CTG ...

LCL ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
1595822 39

CTG ...

LRL ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
19603 117

CTG ...

LKS ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    ncRNA
    sORF
MEF, Spleen_B_cell, Testis,
v6-5
1122474 93

CTG ...

LAR ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
v6-5
1339304 48

ATG ...

MIS ...

Ribo-seq
ATG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
448485 111

TTG ...

LVT ...

Ribo-seq
TTG

5 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF, Spleen_B_cell
306274 42

CTG ...

LAT ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    ncRNA
    sORF
Liver, MEF, v6-5
1696468 69

TTG ...

LRS ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
1695524 165

CTG ...

LTS ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
770577 33

CTG ...

LLQ ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
1598160 33

CTG ...

LSI ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
770756 54

TTG ...

LTS ...

Ribo-seq
TTG

weak

2 sORFs_org_Mouse
    ncRNA
    sORF
MEF, NSC
303943 45

TTG ...

LPI ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF, Spleen_B_cell,
v6-5
298499 36

GTG ...

VTP ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF, Spleen_B_cell,
v6-5
1284472 39

ATA ...

IQE ...

Ribo-seq
ATA

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
648149 57

GTG ...

VQP ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
1695047 123

TTG ...

LGN ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
MEF
646741 63

CTG ...

LST ...

Ribo-seq
CTG

moderate

5 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF, v6-5
305708 63

CTG ...

LTS ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    ncRNA
    sORF
MEF, Spleen_B_cell, v6-5
644360 63

CTG ...

LCV ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
449602 108

GTG ...

VTQ ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF, Spleen_B_cell
1341260 36

CTG ...

LTL ...

Ribo-seq
CTG

moderate

2 sORFs_org_Mouse
    ncRNA
    sORF
E14, MEF
890285 42

TTG ...

LTQ ...

Ribo-seq
TTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
975526 240

AAG ...

KED ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
1702019 117

CTG ...

LES ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
1288136 42

AAG ...

KKA ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
296945 ENSMUST00000102727 Anxa6-201 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

303943 45

TTG ...

LPI ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Liver
456252 84

GTG ...

VPL ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Spleen_B_cell
457274 171

TTG ...

LKF ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, Liver
454710 147

ATG ...

MSR ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, Liver, Spleen_B_cell
770756 54

TTG ...

LTS ...

Ribo-seq
TTG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell
317561 99

CTG ...

LMK ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Liver
888751 33

CTG ...

LAQ ...

Ribo-seq
CTG

strong

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Liver
457459 219

ATG ...

MSL ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, Liver, Spleen_B_cell
307641 54

TTG ...

LET ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, Brain, R1E
456444 228

CTG ...

LPY ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, Liver, Spleen_B_cell
456155 195

TTG ...

LAQ ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, Liver, Spleen_B_cell
457073 123

ATG ...

MFL ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, Liver
891159 96

ATG ...

MKP ...

Ribo-seq
ATG

2 sORFs_org_Mouse
Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
646741 63

CTG ...

LST ...

Ribo-seq
CTG

moderate

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, Brain, Liver
296944 42

TTG ...

LRN ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
308378 81

GTG ...

VPC ...

Ribo-seq
GTG

moderate

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Liver
298499 36

GTG ...

VTP ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Liver, R1E
319246 54

ATG ...

MTS ...

Ribo-seq
ATG

2 sORFs_org_Mouse
Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Glioma, Liver,
MEF, MESC
455986 78

TTG ...

LET ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Spleen_B_cell
457313 186

ATG ...

MRS ...

Ribo-seq
ATG

4 sORFs_org_Mouse
Johnstone2016
    InCDS
    Overlapping
    sORF
B_cell, Glioma, Liver,
MEF, MESC, Spleen_B_cell
456927 78

CTG ...

LAS ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Spleen_B_cell
456610 105

ATG ...

MSE ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, Liver
318316 114

TTG ...

LVT ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
313192 120

GTG ...

VAL ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
658981 111

ATG ...

MSS ...

Ribo-seq
ATG

1 Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
992089 135

TTG ...

LSS ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Liver
770577 33

CTG ...

LLQ ...

Ribo-seq
CTG

weak

3 sORFs_org_Mouse
    Alternative
    Overlapping
    sORF
    Upstream
B_cell, Liver
303419 96

CTG ...

LMK ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Liver
315813 111

GTG ...

VTQ ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Liver
454433 240

TTG ...

LPI ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Liver, Spleen_B_cell
303625 33

ATG ...

MTS ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Liver
303569 81

ATG ...

MSE ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, Brain, Liver
1696543 36

ATG ...

MIL ...

Ribo-seq
ATG

moderate

1 Johnstone2016
    InCDS
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
315857 63

TTG ...

LRN ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
773040 30

CTG ...

LQN ...

Ribo-seq
CTG

weak

3 sORFs_org_Mouse
    Alternative
    Overlapping
    sORF
    Upstream
B_cell, Liver
454457 87

CTG ...

LTS ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Spleen_B_cell
455075 147

TTG ...

LGN ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell
890285 42

TTG ...

LTQ ...

Ribo-seq
TTG

moderate

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Liver
1339304 48

ATG ...

MIS ...

Ribo-seq
ATG

weak

1 Johnstone2016
    InCDS
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
307147 93

ATG ...

MKP ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Liver
455467 273

ATG ...

MPC ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    CDS
    sORF
B_cell, Brain, Liver,
Neutrophil
305708 63

CTG ...

LTS ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, Liver
891924 105

TTG ...

LEL ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Liver
457415 231

GTG ...

VTP ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Liver, Spleen_B_cell
3001399 UNKNOWN_TRANSCRIPT
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

891159 96

ATG ...

MKP ...

Predicted
ATG

1 Samandi2017
    sORF
658981 111

ATG ...

MSS ...

Predicted
ATG

1 Samandi2017
    sORF
457313 186

ATG ...

MRS ...

Predicted
ATG

1 Samandi2017
    sORF

ORFs

85 ORFs
3 known transcripts
137 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

305708 63

CTG...

LTS...

CTG InCDS
Overlapping
sORF
ncRNA
3T3, BMDC, Brain,
R1E, MEF, Spleen_B_cell,
v6-5, B_cell, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
4 sORFs_org_Mouse
19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
5 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
317561 99

CTG...

LMK...

CTG Alternative
InCDS
Overlapping
sORF
E14, Brain, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
308378 81

GTG...

VPC...

GTG ncRNA
sORF
Alternative
InCDS
Overlapping
E14, MEF, v6-5,
3T3, Brain, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
moderate 6 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
303943 45

TTG...

LPI...

TTG Alternative
InCDS
Overlapping
sORF
ncRNA
Brain, Liver, 3T3,
R1E, E14, MEF,
Spleen_B_cell, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
2 sORFs_org_Mouse
19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
4 sORFs_org_Mouse
1602162 69

TTG...

LWP...

TTG Alternative
InCDS
Overlapping
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
455467 273

ATG...

MPC...

ATG CDS
sORF
3T3, BMDC, E14,
MEF, Spleen_B_cell, v6-5,
B_cell, Brain, Liver,
Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
7 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
5 sORFs_org_Mouse
456252 84

GTG...

VPL...

GTG InCDS
Overlapping
sORF
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
1340958 72

GTG...

VAY...

GTG ncRNA
sORF
E14, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
4 sORFs_org_Mouse
319246 54

ATG...

MTS...

ATG Alternative
InCDS
Overlapping
sORF
BMDC, Brain, Glioma,
Liver, MEF, MESC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
Johnstone2016
457274 171

TTG...

LKF...

TTG InCDS
Overlapping
sORF
B_cell, Liver, 3T3,
MEF, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
3 sORFs_org_Mouse
303419 96

CTG...

LMK...

CTG ncRNA
sORF
Alternative
InCDS
Overlapping
E14, MEF, Brain,
Liver, 3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
2 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
454710 147

ATG...

MSR...

ATG InCDS
Overlapping
sORF
B_cell, Liver, Spleen_B_cell,
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
315857 63

TTG...

LRN...

TTG Alternative
InCDS
Overlapping
sORF
BMDC, Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
770756 54

TTG...

LTS...

TTG Alternative
InCDS
Overlapping
sORF
ncRNA
B_cell, MEF, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
weak 2 sORFs_org_Mouse
457415 231

GTG...

VTP...

GTG InCDS
Overlapping
sORF
3T3, MEF, Liver,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
2 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
888751 33

CTG...

LAQ...

CTG Alternative
InCDS
Overlapping
sORF
Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
307641 54

TTG...

LET...

TTG ncRNA
sORF
InCDS
Overlapping
MEF, Spleen_B_cell, B_cell,
Brain, R1E, 3T3,
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
4 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
2 sORFs_org_Mouse
303569 81

ATG...

MSE...

ATG ncRNA
sORF
InCDS
Overlapping
E14, MEF, Spleen_B_cell,
v6-5, 3T3, BMDC,
R1E, B_cell, Brain,
Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
6 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
3 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
4 sORFs_org_Mouse
457459 219

ATG...

MSL...

ATG InCDS
Overlapping
sORF
B_cell, Liver, Spleen_B_cell,
3T3, BMDC, E14,
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
4 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
6 sORFs_org_Mouse
1122152 69

TTG...

LFQ...

TTG ncRNA
sORF
MEF, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1603573 90

CTG...

LGM...

CTG Alternative
InCDS
Overlapping
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
448461 30

CTG...

LKL...

CTG ncRNA
sORF
E14, MEF, Spleen_B_cell,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
5 sORFs_org_Mouse
648149 57

GTG...

VQP...

GTG InCDS
Overlapping
sORF
ncRNA
3T3, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
450705 33

CTG...

LLK...

CTG ncRNA
sORF
MEF, Spleen_B_cell, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
5 sORFs_org_Mouse
303625 33

ATG...

MTS...

ATG Alternative
InCDS
Overlapping
sORF
3T3, BMDC, MEF,
v6-5, Brain, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
5 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
454457 87

CTG...

LTS...

CTG InCDS
Overlapping
sORF
MEF, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
891159 96

ATG...

MKP...

ATG sORF
Alternative
InCDS
Overlapping
Glioma, Liver,
MEF, MESC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3001399 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
Johnstone2016
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
455075 147

TTG...

LGN...

TTG InCDS
Overlapping
sORF
MEF, Spleen_B_cell, B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
2 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
318316 114

TTG...

LVT...

TTG Alternative
InCDS
Overlapping
sORF
E14, MEF, Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
3 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
1129824 192

CTG...

LTS...

CTG InCDS
Overlapping
sORF
E14, MEF, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
6 sORFs_org_Mouse
1599899 138

CTG...

LSQ...

CTG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
3 sORFs_org_Mouse
453496 87

ATG...

MPS...

ATG ncRNA
sORF
E14, MEF, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
4 sORFs_org_Mouse
456155 195

TTG...

LAQ...

TTG InCDS
Overlapping
sORF
MEF, B_cell, Liver,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
456444 228

CTG...

LPY...

CTG InCDS
Overlapping
sORF
B_cell, Liver, Spleen_B_cell,
3T3, BMDC, E14,
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
4 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
6 sORFs_org_Mouse
306274 42

CTG...

LAT...

CTG Alternative
InCDS
Overlapping
sORF
ncRNA
Brain, Liver, MEF,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
5 sORFs_org_Mouse
1038998 288

CTG...

LAT...

CTG ncRNA
sORF
Neutrophil, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1339219 96

CTG...

LSL...

CTG ncRNA
sORF
E14, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1291197 45

AAG...

KPV...

AAG ncRNA
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
646741 63

CTG...

LST...

CTG Alternative
InCDS
Overlapping
sORF
ncRNA
3T3, B_cell, Brain,
Liver, E14, MEF,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
moderate 5 sORFs_org_Mouse
307147 93

ATG...

MKP...

ATG Alternative
InCDS
Overlapping
sORF
ncRNA
3T3, BMDC, E14,
MEF, Brain, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
2 sORFs_org_Mouse
19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
2 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
891924 105

TTG...

LEL...

TTG Alternative
InCDS
Overlapping
sORF
E14, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
315813 111

GTG...

VTQ...

GTG Alternative
InCDS
Overlapping
sORF
E14, MEF, R1E,
Brain, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
4 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
658981 111

ATG...

MSS...

ATG sORF
Alternative
InCDS
Overlapping
Glioma, Liver,
MEF, MESC, 3T3,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3001399 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
1 Johnstone2016
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
3 sORFs_org_Mouse
773040 30

CTG...

LQN...

CTG ncRNA
sORF
Alternative
Overlapping
Upstream
MEF, B_cell, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
weak 3 sORFs_org_Mouse
457073 123

ATG...

MFL...

ATG InCDS
Overlapping
sORF
B_cell, Liver, 3T3,
BMDC, MEF, Spleen_B_cell,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
7 sORFs_org_Mouse
1704588 162

CTG...

LDL...

CTG InCDS
Overlapping
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
1696735 132

CTG...

LKV...

CTG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
2 sORFs_org_Mouse
654716 117

CTG...

LAT...

CTG InCDS
Overlapping
sORF
3T3, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
2 sORFs_org_Mouse
1340416 117

GTG...

VAL...

GTG ncRNA
sORF
E14, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
3 sORFs_org_Mouse
313192 120

GTG...

VAL...

GTG Alternative
InCDS
Overlapping
sORF
E14, MEF, Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
2 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
1129404 96

CTG...

LAT...

CTG ncRNA
sORF
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
1 sORFs_org_Mouse
296944 42

TTG...

LRN...

TTG Alternative
InCDS
Overlapping
sORF
Brain, 3T3, BMDC,
MEF, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
5 sORFs_org_Mouse
1704956 156

CTG...

LKV...

CTG InCDS
Overlapping
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
298499 36

GTG...

VTP...

GTG Alternative
InCDS
Overlapping
sORF
ncRNA
Liver, R1E, 3T3,
Brain, E14, MEF,
Spleen_B_cell, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
2 sORFs_org_Mouse
19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
4 sORFs_org_Mouse
455986 78

TTG...

LET...

TTG InCDS
Overlapping
sORF
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
457313 186

ATG...

MRS...

ATG InCDS
Overlapping
sORF
B_cell, Glioma, Liver,
MEF, MESC, Spleen_B_cell,
3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
4 sORFs_org_Mouse
Johnstone2016
3001399 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
2 sORFs_org_Mouse
456927 78

CTG...

LAS...

CTG InCDS
Overlapping
sORF
Spleen_B_cell, 3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
456610 105

ATG...

MSE...

ATG InCDS
Overlapping
sORF
B_cell, Liver, MEF,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
2 sORFs_org_Mouse
1342508 204

GTG...

VTL...

GTG InCDS
Overlapping
sORF
E14, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
4 sORFs_org_Mouse
1696444 138

CTG...

LDL...

CTG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1696543 36

ATG...

MIL...

ATG ncRNA
sORF
InCDS
Overlapping
MEF, Glioma, Liver,
MESC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
moderate 2 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
moderate 1 Johnstone2016
644360 63

CTG...

LCV...

CTG InCDS
Overlapping
sORF
ncRNA
3T3, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
992089 135

TTG...

LSS...

TTG InCDS
Overlapping
sORF
Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
452917 99

ATG...

MFL...

ATG ncRNA
sORF
MEF, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
4 sORFs_org_Mouse
1695748 75

CTG...

LCL...

CTG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
1 sORFs_org_Mouse
770577 33

CTG...

LLQ...

CTG Alternative
Overlapping
sORF
Upstream
ncRNA
B_cell, Liver, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
weak 3 sORFs_org_Mouse
19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
1595822 39

CTG...

LRL...

CTG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
19603 117

CTG...

LKS...

CTG ncRNA
sORF
MEF, Spleen_B_cell, Testis,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
4 sORFs_org_Mouse
1122474 93

CTG...

LAR...

CTG ncRNA
sORF
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1339304 48

ATG...

MIS...

ATG ncRNA
sORF
InCDS
Overlapping
E14, Glioma, Liver,
MEF, MESC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
weak 1 Johnstone2016
448485 111

TTG...

LVT...

TTG ncRNA
sORF
E14, MEF, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
5 sORFs_org_Mouse
454433 240

TTG...

LPI...

TTG InCDS
Overlapping
sORF
Liver, Spleen_B_cell, 3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
1696468 69

TTG...

LRS...

TTG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1695524 165

CTG...

LTS...

CTG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1598160 33

CTG...

LSI...

CTG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
1284472 39

ATA...

IQE...

ATA ncRNA
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
1695047 123

TTG...

LGN...

TTG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1604069 84

ATG...

MSR...

ATG Alternative
InCDS
Overlapping
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
1596097 51

GTG...

VSR...

GTG Alternative
InCDS
Overlapping
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

298500 ENSMUST00000108883 Anxa6-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
449602 108

GTG...

VTQ...

GTG ncRNA
sORF
E14, MEF, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
6 sORFs_org_Mouse
1341260 36

CTG...

LTL...

CTG ncRNA
sORF
E14, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
moderate 2 sORFs_org_Mouse
890285 42

TTG...

LTQ...

TTG Alternative
InCDS
Overlapping
sORF
ncRNA
Brain, Liver, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

296945 ENSMUST00000102727 Anxa6-201 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
975526 240

AAG...

KED...

AAG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1702019 117

CTG...

LES...

CTG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1288136 42

AAG...

KKA...

AAG ncRNA
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

19604 ENSMUST00000148298 Anxa6-203 processed_transcript Ribo-seq
1 sORFs_org_Mouse

Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

bidirectional_promoter_lncRNA

IG_C_gene

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

pseudogene

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

3T3

B_cell

BMDC

Brain

C2C12

E14

Glioma

Liver

MEF

MESC

Neutrophil

NSC

R1E

Skin_tumor

Spleen_B_cell

Testis

v6-5