Gene NCBI:112694759

Gene

ID CARD

NCBI:112694759

Aliases

ENSMUSG00000023984
Gm20517, Med20, MGI:5141982
NCBI:112694759, OFF:Gm20517, Trfp

Chromosome

Transcripts

39 ORFs
3 known transcripts
59 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

36055

ENSMUST00000132397

Gm20517-202

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
38381	171	CTG ...	LLE ...	Ribo-seq	CTG		7	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, E14, MEF, Neutrophil, R1E, Testis, v6-5
38248	39	TTG ...	LEA ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	MEF, Testis, v6-5
36595	69	GTG ...	VKV ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E, Testis
1626405	177	CTG ...	LRA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF
37194	96	CTG ...	LEM ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, R1E, Testis, v6-5
36090	198	GTG ...	VVA ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, Neutrophil, R1E, Testis, v6-5
36054	63	GTG ...	VGT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E, Testis
479296	45	TTG ...	LRP ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E
38494	222	CTG ...	LSC ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E, Testis, v6-5
479705	30	ATG ...	MRS ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, R1E
37124	117	GTG ...	VEL ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, MEF, R1E, Testis, v6-5
954601	93	CTG ...	LES ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	MEF, v6-5
708981	45	TTG ...	LGT ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E
1863333	78	CTG ...	LSE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Downstream NMD sORF	R1E
480657	48	ATG ...	MAL ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS NMD Overlapping sORF	Glioma, Liver, MEF, MESC, v6-5
480900	30	CTG ...	LTP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	v6-5
36535	162	GTG ...	VSQ ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, Testis, v6-5
795890	198	GTG ...	VCP ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF
1190745	81	ATG ...	MFP ...	Ribo-seq	ATG	moderate	1	Johnstone2016	Alternative Downstream NMD sORF	Glioma, Liver, MEF, MESC
1152662	84	CTG ...	LSS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	MEF, v6-5
1627220	216	TTG ...	LAL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF
479468	63	TTG ...	LPS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	v6-5
1625749	183	CTG ...	LWL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF
1863257	48	GTG ...	VHS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
36874	72	CTG ...	LVK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E, Testis
36107	153	GTG ...	VKL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E, Testis
37116	216	GTG ...	VEY ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, Neutrophil, R1E, Testis, v6-5
38444	57	GTG ...	VDC ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, R1E, Testis
36940	255	CTG ...	LMY ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E, Testis, v6-5
37289	147	GTG ...	VAE ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, Testis, v6-5
482800	63	GTG ...	VPR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E
1626163	210	TTG ...	LCF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF
37644	162	GTG ...	VLM ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E, Testis
37475	195	GTG ...	VAS ...	Ribo-seq	GTG		7	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, E14, MEF, Neutrophil, R1E, Testis, v6-5
37715	246	GTG ...	VMH ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E, Testis, v6-5

1358140

ENSMUST00000146105

Gm20517-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
37194	96	CTG ...	LEM ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	E14
37289	147	GTG ...	VAE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	E14
36535	162	GTG ...	VSQ ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	E14

379667

ENSMUST00000130830

Gm20517-201

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
36535	162	GTG ...	VSQ ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	MEF
36940	255	CTG ...	LMY ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
37475	195	GTG ...	VAS ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
37124	117	GTG ...	VEL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	MEF
36595	69	GTG ...	VKV ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
37116	216	GTG ...	VEY ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Brain, Liver, Spleen_B_cell
1191253	45	CTG ...	LGN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	E14
37715	246	GTG ...	VMH ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
1193606	48	ATG ...	MKR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	E14
38381	171	CTG ...	LLE ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, Liver, Spleen_B_cell
36054	63	GTG ...	VGT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
954910	75	AGG ...	RVW ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Intronic sORF	BMDC
955213	144	AAG ...	KGF ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	BMDC
479705	30	ATG ...	MRS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
36090	198	GTG ...	VVA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
38494	222	CTG ...	LSC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
37194	96	CTG ...	LEM ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	C2C12, MEF
36107	153	GTG ...	VKL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
37644	162	GTG ...	VLM ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
36874	72	CTG ...	LVK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
954601	93	CTG ...	LES ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	BMDC

ORFs

39 ORFs
3 known transcripts
59 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

38381

171

CTG...

LLE...

CTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

B_cell, E14, MEF,
Neutrophil, R1E, Testis,
v6-5, Brain, Liver,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		7	sORFs_org_Mouse
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		3	sORFs_org_Mouse

708981

TTG...

LGT...

TTG

Alternative
InCDS
Overlapping
sORF
NMD
Intronic

3T3, R1E, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
704591	ENSMUST00000024778	Med20-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
795891	ENSMUST00000138638	Med20-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

38494

222

CTG...

LSC...

CTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Spleen_B_cell, R1E, Testis,
v6-5, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

38248

TTG...

LEA...

TTG

Alternative
NMD
Overlapping
sORF
Upstream
Intronic

MEF, Testis, v6-5,
B_cell, Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq	strong	3	sORFs_org_Mouse
795891	ENSMUST00000138638	Med20-203	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
704591	ENSMUST00000024778	Med20-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

37194

CTG...

LEM...

CTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

E14, MEF, R1E,
Testis, v6-5, Brain,
Liver, Spleen_B_cell, C2C12,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1358140	ENSMUST00000146105	Gm20517-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
381225	ENSMUST00000133855	Med20-202	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
795891	ENSMUST00000138638	Med20-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

36595

GTG...

VKV...

GTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

R1E, Testis, Brain,
Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

479468

TTG...

LPS...

TTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Brain, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1626405

177

CTG...

LRA...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

37124

117

GTG...

VEL...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Spleen_B_cell, MEF, E14,
R1E, Testis, v6-5,
Brain, Liver, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse
381225	ENSMUST00000133855	Med20-202	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
795891	ENSMUST00000138638	Med20-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

36090

198

GTG...

VVA...

GTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

MEF, Neutrophil, R1E,
Testis, v6-5, B_cell,
Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
795891	ENSMUST00000138638	Med20-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse

479296

TTG...

LRP...

TTG

Alternative
InCDS
Overlapping
sORF
NMD
Intronic

3T3, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
704591	ENSMUST00000024778	Med20-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

36535

162

GTG...

VSQ...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

MEF, Testis, v6-5,
E14, Brain, Liver,
B_cell, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
1358140	ENSMUST00000146105	Gm20517-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
381225	ENSMUST00000133855	Med20-202	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
795891	ENSMUST00000138638	Med20-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

36054

GTG...

VGT...

GTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

R1E, Testis, Brain,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse

37644

162

GTG...

VLM...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Spleen_B_cell, Brain, Liver,
R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

37289

147

GTG...

VAE...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Brain, Liver, Spleen_B_cell,
E14, B_cell, R1E,
MEF, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
381225	ENSMUST00000133855	Med20-202	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
1358140	ENSMUST00000146105	Gm20517-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
795891	ENSMUST00000138638	Med20-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

480900

CTG...

LTP...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic
NMD

3T3, Brain, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
704591	ENSMUST00000024778	Med20-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

36940

255

CTG...

LMY...

CTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Brain, Liver, Spleen_B_cell,
R1E, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

37475

195

GTG...

VAS...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Liver, Spleen_B_cell, B_cell,
E14, MEF, Neutrophil,
R1E, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		7	sORFs_org_Mouse

479705

ATG...

MRS...

ATG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

MEF, R1E, 3T3,
Glioma, Liver, MESC,
Spleen_B_cell, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
704591	ENSMUST00000024778	Med20-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse
795891	ENSMUST00000138638	Med20-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

954601

CTG...

LES...

CTG

Alternative
NMD
Overlapping
sORF
Upstream
Intronic

MEF, v6-5, E14,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
381225	ENSMUST00000133855	Med20-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1190745

ATG...

MFP...

ATG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

E14, Glioma, Liver,
MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1190300	ENSMUST00000024779	Usp49-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq	moderate	1	Johnstone2016

480657

ATG...

MAL...

ATG

Alternative
InCDS
Overlapping
sORF
NMD
Intronic

3T3, Glioma, Liver,
MEF, MESC, v6-5,
Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
704591	ENSMUST00000024778	Med20-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse Johnstone2016
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse Johnstone2016
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

37116

216

GTG...

VEY...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Brain, Liver, Spleen_B_cell,
MEF, Neutrophil, R1E,
Testis, v6-5, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		3	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
795891	ENSMUST00000138638	Med20-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1191253

CTG...

LGN...

CTG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

37715

246

GTG...

VMH...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Brain, Liver, Spleen_B_cell,
R1E, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

1863333

CTG...

LSE...

CTG

Downstream
NMD
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1152662

CTG...

LSS...

CTG

Intronic
sORF
Alternative
NMD
Overlapping
Upstream

E14, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
381225	ENSMUST00000133855	Med20-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

795890

198

GTG...

VCP...

GTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

MEF, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
795891	ENSMUST00000138638	Med20-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1193606

ATG...

MKR...

ATG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1627220

216

TTG...

LAL...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

954910

AGG...

RVW...

AGG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

955213

144

AAG...

KGF...

AAG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1625749

183

CTG...

LWL...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

1863257

GTG...

VHS...

GTG

Alternative
Downstream
NMD
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

36874

CTG...

LVK...

CTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

R1E, Testis, Brain,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse

36107

153

GTG...

VKL...

GTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

R1E, Testis, Brain,
Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
379667	ENSMUST00000130830	Gm20517-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

482800

GTG...

VPR...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

Spleen_B_cell, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
704591	ENSMUST00000024778	Med20-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

38444

GTG...

VDC...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Brain, E14, R1E,
Testis, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
381225	ENSMUST00000133855	Med20-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
478378	ENSMUST00000149893	Med20-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1626163

210

TTG...

LCF...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36055	ENSMUST00000132397	Gm20517-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

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