Gene NCBI:108077 | MetamORF

Gene

ID CARD

NCBI:108077

Aliases

4930534J06Rik
AW214248, Ddx13, ENSMUSG00000040356
MGI:1099835, NCBI:108077, OFF:Skiv2l
SKI, Ski2w, Skiv2l

Chromosome

Transcripts

66 ORFs
10 known transcripts
127 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

854469

ENSMUST00000174887

Skiv2l-211

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
706943	81	CTG ...	LCQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	E14, Liver
382443	60	CTG ...	LFL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	E14, MEF
381520	57	GTG ...	VQL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	E14
383647	123	CTG ...	LSN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	E14
703967	90	ATG ...	MAS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	Liver
1626808	51	CTG ...	LCR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	MEF
36820	51	CTG ...	LHP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	E14
1625754	72	CTG ...	LWP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
1454885	45	TTG ...	LTL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
383373	72	CTG ...	LLT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	E14
380379	54	CTG ...	LSS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	E14, MEF

379838

ENSMUST00000174226

Skiv2l-209

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
382443	60	CTG ...	LFL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
382050	117	CTG ...	LPP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	BMDC, Brain
383722	120	GTG ...	VAA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
381318	147	GTG ...	VFQ ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
385129	48	CTG ...	LLN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
383075	126	GTG ...	VIS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
387224	159	TTG ...	LVV ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	Brain
382464	189	TTG ...	LAG ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	Brain
381084	135	CTG ...	LAE ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
381409	72	GTG ...	VGC ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
384381	147	CTG ...	LKR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
387328	138	CTG ...	LLE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
382380	120	CTG ...	LSA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
386386	99	CTG ...	LNL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
383647	123	CTG ...	LSN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
383513	102	TTG ...	LSL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Brain
381715	78	CTG ...	LEV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
379837	144	GTG ...	VAK ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
388091	120	TTG ...	LEQ ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Brain
383439	126	CTG ...	LHL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
386237	45	CTG ...	LNV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
36377	51	CTG ...	LSA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
382892	135	CTG ...	LEN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
380379	54	CTG ...	LSS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
383373	72	CTG ...	LLT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
381520	57	GTG ...	VQL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain

36378

ENSMUST00000174363

Skiv2l-210

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
481572	93	CTG ...	LYS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Spleen_B_cell
381520	57	GTG ...	VQL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	R1E
482657	36	TTG ...	LMK ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
381084	135	CTG ...	LAE ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	R1E, Spleen_B_cell
383647	123	CTG ...	LSN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	3T3
36377	51	CTG ...	LSA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Testis
701532	60	CTG ...	LTF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	3T3
1863525	159	TTG ...	LVL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	R1E
482352	93	CTG ...	LRV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
380379	54	CTG ...	LSS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, R1E
706146	135	TTG ...	LSQ ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
388091	120	TTG ...	LEQ ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
479455	75	GTG ...	VAP ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
382892	135	CTG ...	LEN ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, R1E
481893	42	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
382464	189	TTG ...	LAG ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Intronic sORF	R1E, Spleen_B_cell
382050	117	CTG ...	LPP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, R1E, Spleen_B_cell
385129	48	CTG ...	LLN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	3T3
385762	96	CTG ...	LEH ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Spleen_B_cell
387328	138	CTG ...	LLE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
706943	81	CTG ...	LCQ ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Brain, R1E
479008	108	CTG ...	LSF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
479879	33	ATG ...	MKS ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
481341	87	GTG ...	VDA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Spleen_B_cell
702427	84	CTG ...	LPW ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	3T3
700983	48	TTG ...	LLR ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
383439	126	CTG ...	LHL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
36820	51	CTG ...	LHP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, R1E, Testis
381409	72	GTG ...	VGC ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	3T3
1862016	153	TTG ...	LCD ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	R1E
382443	60	CTG ...	LFL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, R1E
479571	63	CTG ...	LEW ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
708890	126	ATG ...	MCF ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
383075	126	GTG ...	VIS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, Spleen_B_cell
386386	99	CTG ...	LNL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, R1E
703967	90	ATG ...	MAS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
478522	39	CTG ...	LIC ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Spleen_B_cell
387224	159	TTG ...	LVV ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Intronic sORF	R1E, Spleen_B_cell
37443	102	GTG ...	VWE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Testis
707823	48	TTG ...	LGA ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	3T3
381715	78	CTG ...	LEV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, R1E
704856	60	GTG ...	VHW ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	3T3
37758	90	GTG ...	VLI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Testis
384381	147	CTG ...	LKR ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, Spleen_B_cell
381318	147	GTG ...	VFQ ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
38275	96	CTG ...	LLR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell

379948

ENSMUST00000172686

Skiv2l-202

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
383373	72	CTG ...	LLT ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, Liver, R1E
481572	93	CTG ...	LYS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
385762	96	CTG ...	LEH ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
383439	126	CTG ...	LHL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Liver
1410747	39	CTG ...	LLD ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Liver
36820	51	CTG ...	LHP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
479571	63	CTG ...	LEW ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
379947	36	CTG ...	LDS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
383075	126	GTG ...	VIS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Liver
384381	147	CTG ...	LKR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
481893	42	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Liver
383647	123	CTG ...	LSN ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, Liver, R1E
381520	57	GTG ...	VQL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
36377	51	CTG ...	LSA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
388091	120	TTG ...	LEQ ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Liver

38276

ENSMUST00000172878

Skiv2l-204

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
481341	87	GTG ...	VDA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	R1E
704276	30	CTG ...	LSI ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
1864025	183	CTG ...	LAD ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
703111	72	GTG ...	VED ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, R1E
38275	96	CTG ...	LLR ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, R1E, Testis
702561	165	TTG ...	LTP ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
482352	93	CTG ...	LRV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	3T3

701881

ENSMUST00000173305

Skiv2l-206

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
481572	93	CTG ...	LYS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
479455	75	GTG ...	VAP ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Intronic sORF	3T3
479879	33	ATG ...	MKS ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
482657	36	TTG ...	LMK ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3

1410991

ENSMUST00000173403

Skiv2l-207

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
385762	96	CTG ...	LEH ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
36377	51	CTG ...	LSA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Liver, R1E
379947	36	CTG ...	LDS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
384381	147	CTG ...	LKR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
383075	126	GTG ...	VIS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
481893	42	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
1410747	39	CTG ...	LLD ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E

3020423

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
703967	90	ATG ...	MAS ...	Predicted	ATG		1	Samandi2017	sORF
708890	126	ATG ...	MCF ...	Predicted	ATG		1	Samandi2017	sORF

385664

ENSMUST00000046022

Skiv2l-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
385663	42	CTG ...	LVT ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
385728	63	ATG ...	MAE ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
483673	135	GTG ...	VAP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
712506	195	CTG ...	LTF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
703967	90	ATG ...	MAS ...	Ribo-seq	ATG	moderate	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
708890	126	ATG ...	MCF ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
709399	219	CTG ...	LPW ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3

1004100

ENSMUST00000172966

Skiv2l-205

nonsense_mediated_decay

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

380379

CTG ...

LSS ...

Ribo-seq

CTG

sORFs_org_Mouse

Brain

382443

CTG ...

LFL ...

Ribo-seq

CTG

sORFs_org_Mouse

Brain

1410541

ENSMUST00000172803

Skiv2l-203

retained_intron

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

ORF annotations

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

383722

120

GTG ...

VAA ...

Ribo-seq

GTG

sORFs_org_Mouse

Liver

379837

144

GTG ...

VAK ...

Ribo-seq

GTG

sORFs_org_Mouse

Liver

ORFs

66 ORFs
10 known transcripts
127 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

706943

CTG...

LCQ...

CTG

Intronic
sORF

E14, Liver, 3T3,
B_cell, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
854469	ENSMUST00000174887	Skiv2l-211	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		4	sORFs_org_Mouse

382443

CTG...

LFL...

CTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

E14, MEF, Brain,
3T3, B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
854469	ENSMUST00000174887	Skiv2l-211	retained_intron	Ribo-seq		2	sORFs_org_Mouse
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
1004100	ENSMUST00000172966	Skiv2l-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		3	sORFs_org_Mouse

481572

CTG...

LYS...

CTG

Intronic
sORF

3T3, Spleen_B_cell, R1E,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
701881	ENSMUST00000173305	Skiv2l-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

383373

CTG...

LLT...

CTG

Intronic
sORF

Brain, Liver, R1E,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq		3	sORFs_org_Mouse
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
854469	ENSMUST00000174887	Skiv2l-211	retained_intron	Ribo-seq		1	sORFs_org_Mouse

381520

GTG...

VQL...

GTG

Intronic
sORF

R1E, E14, Brain,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
854469	ENSMUST00000174887	Skiv2l-211	retained_intron	Ribo-seq		1	sORFs_org_Mouse
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

382050

117

CTG...

LPP...

CTG

Intronic
sORF

BMDC, Brain, 3T3,
R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		3	sORFs_org_Mouse

481341

GTG...

VDA...

GTG

Intronic
sORF

R1E, 3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38276	ENSMUST00000172878	Skiv2l-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse

482657

TTG...

LMK...

TTG

Intronic
sORF

Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
701881	ENSMUST00000173305	Skiv2l-206	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

704276

CTG...

LSI...

CTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38276	ENSMUST00000172878	Skiv2l-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

381084

135

CTG...

LAE...

CTG

Intronic
sORF

R1E, Spleen_B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

383722

120

GTG...

VAA...

GTG

Intronic
sORF

Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
1410541	ENSMUST00000172803	Skiv2l-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

385762

CTG...

LEH...

CTG

Intronic
sORF

R1E, Brain, Liver,
3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1410991	ENSMUST00000173403	Skiv2l-207	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

381318

147

GTG...

VFQ...

GTG

Intronic
sORF

Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

383647

123

CTG...

LSN...

CTG

Intronic
sORF

3T3, E14, Brain,
Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
854469	ENSMUST00000174887	Skiv2l-211	retained_intron	Ribo-seq		1	sORFs_org_Mouse
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq		3	sORFs_org_Mouse

36377

CTG...

LSA...

CTG

Intronic
sORF

Testis, Liver, R1E,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
1410991	ENSMUST00000173403	Skiv2l-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

479455

GTG...

VAP...

GTG

Intronic
sORF

3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
701881	ENSMUST00000173305	Skiv2l-206	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

385129

CTG...

LLN...

CTG

Intronic
sORF

Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

703967

ATG...

MAS...

ATG

sORF
Intronic
Alternative
InCDS
Overlapping

Liver, 3T3,
Glioma, MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
3020423	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
854469	ENSMUST00000174887	Skiv2l-211	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
385664	ENSMUST00000046022	Skiv2l-201	protein_coding	Ribo-seq	moderate	1	Johnstone2016

383075

126

GTG...

VIS...

GTG

Intronic
sORF

Brain, R1E, Liver,
3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
1410991	ENSMUST00000173403	Skiv2l-207	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

701532

CTG...

LTF...

CTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

387224

159

TTG...

LVV...

TTG

Intronic
sORF

Brain, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

382464

189

TTG...

LAG...

TTG

Intronic
sORF

Brain, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

479879

ATG...

MKS...

ATG

Intronic
sORF

3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
701881	ENSMUST00000173305	Skiv2l-206	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

381409

GTG...

VGC...

GTG

Intronic
sORF

Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1864025

183

CTG...

LAD...

CTG

Intronic
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38276	ENSMUST00000172878	Skiv2l-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

703111

GTG...

VED...

GTG

Intronic
sORF

3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38276	ENSMUST00000172878	Skiv2l-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

384381

147

CTG...

LKR...

CTG

Intronic
sORF

Brain, R1E, Liver,
3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
1410991	ENSMUST00000173403	Skiv2l-207	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

387328

138

CTG...

LLE...

CTG

Intronic
sORF

Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1863525

159

TTG...

LVL...

TTG

Intronic
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

482352

CTG...

LRV...

CTG

Intronic
sORF

Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
38276	ENSMUST00000172878	Skiv2l-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

382380

120

CTG...

LSA...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse

380379

CTG...

LSS...

CTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

3T3, B_cell, R1E,
Brain, E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		3	sORFs_org_Mouse
1004100	ENSMUST00000172966	Skiv2l-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
854469	ENSMUST00000174887	Skiv2l-211	retained_intron	Ribo-seq		2	sORFs_org_Mouse

386386

CTG...

LNL...

CTG

Intronic
sORF

Brain, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse

379947

CTG...

LDS...

CTG

Intronic
sORF

R1E, Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1410991	ENSMUST00000173403	Skiv2l-207	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

706146

135

TTG...

LSQ...

TTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

388091

120

TTG...

LEQ...

TTG

Intronic
sORF

3T3, Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

383439

126

CTG...

LHL...

CTG

Intronic
sORF

Liver, Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1410747

CTG...

LLD...

CTG

Intronic
sORF

Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
1410991	ENSMUST00000173403	Skiv2l-207	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

382892

135

CTG...

LEN...

CTG

Intronic
sORF

3T3, R1E, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse

481893

CTG...

LLL...

CTG

Intronic
sORF

Spleen_B_cell, Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
1410991	ENSMUST00000173403	Skiv2l-207	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

1626808

CTG...

LCR...

CTG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
854469	ENSMUST00000174887	Skiv2l-211	retained_intron	Ribo-seq		1	sORFs_org_Mouse

383513

102

TTG...

LSL...

TTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse

36820

CTG...

LHP...

CTG

Intronic
sORF

Brain, Liver, E14,
R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
854469	ENSMUST00000174887	Skiv2l-211	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		3	sORFs_org_Mouse

385663

CTG...

LVT...

CTG

Alternative
InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385664	ENSMUST00000046022	Skiv2l-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

385728

ATG...

MAE...

ATG

Alternative
InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385664	ENSMUST00000046022	Skiv2l-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

479571

CTG...

LEW...

CTG

Intronic
sORF

Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379948	ENSMUST00000172686	Skiv2l-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

483673

135

GTG...

VAP...

GTG

Alternative
InCDS
Overlapping
sORF

Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385664	ENSMUST00000046022	Skiv2l-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

381715

CTG...

LEV...

CTG

Intronic
sORF

Brain, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse

38275

CTG...

LLR...

CTG

Intronic
sORF

3T3, R1E, Testis,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38276	ENSMUST00000172878	Skiv2l-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1625754

CTG...

LWP...

CTG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
854469	ENSMUST00000174887	Skiv2l-211	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

379837

144

GTG...

VAK...

GTG

Intronic
sORF

Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
1410541	ENSMUST00000172803	Skiv2l-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

479008

108

CTG...

LSF...

CTG

Intronic
sORF

Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

702427

CTG...

LPW...

CTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

700983

TTG...

LLR...

TTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

386237

CTG...

LNV...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379838	ENSMUST00000174226	Skiv2l-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1862016

153

TTG...

LCD...

TTG

Intronic
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

708890

126

ATG...

MCF...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, Glioma,
Liver, MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
3020423	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
385664	ENSMUST00000046022	Skiv2l-201	protein_coding	Ribo-seq	weak	1	Johnstone2016

478522

CTG...

LIC...

CTG

Intronic
sORF

3T3, B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse

37443

102

GTG...

VWE...

GTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

712506

195

CTG...

LTF...

CTG

Alternative
InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385664	ENSMUST00000046022	Skiv2l-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

707823

TTG...

LGA...

TTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

702561

165

TTG...

LTP...

TTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38276	ENSMUST00000172878	Skiv2l-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

1454885

TTG...

LTL...

TTG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
854469	ENSMUST00000174887	Skiv2l-211	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

704856

GTG...

VHW...

GTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

37758

GTG...

VLI...

GTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36378	ENSMUST00000174363	Skiv2l-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

709399

219

CTG...

LPW...

CTG

Alternative
InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385664	ENSMUST00000046022	Skiv2l-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

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