Gene NCBI:105980075

Gene

ID CARD

NCBI:105980075

Aliases

Dpm1-adnp
Gm20716, MGI:5313163, NCBI:105980075
OFF:Gm20716

Chromosome

Transcripts

66 ORFs
1 known transcript
66 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

44573

ENSMUST00000138667

Gm20716-201

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1212756	186	AAG ...	KDQ ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Downstream NMD sORF	E14
97252	33	ATG ...	MAL ...	Ribo-seq	ATG	strong	4	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain, E14, R1E, Spleen_B_cell
493385	105	CTG ...	LPV ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Spleen_B_cell
47168	90	GTG ...	VDR ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	CDS NMD sORF	Brain, Liver
45055	57	TTG ...	LFL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Testis
1208741	135	ATT ...	III ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
964520	141	ATT ...	ILA ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Downstream NMD sORF	BMDC
1212260	60	ATC ...	IIY ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
117440	96	ATG ...	MLQ ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain, E14, R1E
1725158	36	ATG ...	MKR ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
114933	222	CTG ...	LPT ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, R1E
735091	57	TTG ...	LSG ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
1212137	156	ACG ...	TGA ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
49216	75	TTG ...	LPT ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver, MEF, Testis
1723169	42	GTG ...	VSA ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
498738	81	GTG ...	VTL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Spleen_B_cell
1208926	96	TTG ...	LSA ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Downstream NMD sORF	E14
1870664	300	TTG ...	LFR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
1214229	291	AGG ...	RSS ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Downstream NMD sORF	E14
45053	42	TTG ...	LKR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Testis
492424	63	TTG ...	LGG ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	CDS NMD sORF	Liver
1212213	225	AAG ...	KNS ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Downstream NMD sORF	E14
737234	96	ATG ...	MHL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1167336	102	ATG ...	MPE ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
48853	75	TTG ...	LVF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Testis
1211525	87	AAG ...	KDP ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
44572	99	CTG ...	LLR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Testis
1723241	30	GTG ...	VRT ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
48579	72	ATG ...	MEA ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Testis
46806	255	GTG ...	VQD ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Downstream NMD sORF	Brain, E14, R1E, Testis
48951	75	ATG ...	MME ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Testis
109534	252	GTG ...	VLV ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
108350	33	ATG ...	MHR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
44741	48	CTG ...	LEL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Testis
96681	36	GTG ...	VTL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
1207253	36	TTG ...	LKL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1207199	231	ATT ...	IVN ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
861274	114	CTG ...	LRL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver
1210036	96	ATA ...	IVL ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1726134	36	TTG ...	LTV ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
49145	42	CTG ...	LNN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Testis
1723387	39	TTG ...	LMK ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
97825	138	ATG ...	MQI ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
49403	81	GTG ...	VLL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver, MEF, Testis
111547	45	ATG ...	MKL ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF, R1E
1162250	36	CTG ...	LKG ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	CDS NMD sORF	Liver
1209667	138	TTG ...	LAR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Downstream NMD sORF	E14
105618	189	GTG ...	VKT ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
115282	180	TTG ...	LKI ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, R1E
46612	48	CTG ...	LPL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver, Testis
1209414	231	ATG ...	MHS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
46582	36	GTG ...	VWL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver
48414	96	CTG ...	LRP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Testis
861237	117	TTG ...	LLR ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver
46511	78	CTG ...	LLP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver, MEF, Testis
15457	30	CTG ...	LLV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver
47910	60	TTG ...	LIL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Testis
1210206	72	AAG ...	KGN ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
45529	33	ATG ...	MES ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Testis
1213218	207	GTG ...	VKP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
98926	198	ATG ...	MSI ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, R1E
1214034	294	ACG ...	TNQ ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1876658	291	TTG ...	LFF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
101380	126	ATG ...	MVQ ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
109720	123	GTG ...	VQS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
47808	45	CTG ...	LPT ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Testis

ORFs

66 ORFs
1 known transcript
66 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

1212756

186

AAG...

KDQ...

AAG

Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

49145

CTG...

LNN...

CTG

Intronic
sORF
ncRNA
Alternative
InCDS
NMD
Overlapping

Liver, B_cell, Testis,
3T3, R1E, v6-5,
Brain, MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15178	ENSMUST00000156800	Dpm1-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
808774	ENSMUST00000150437	Dpm1-207	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
100432	ENSMUST00000109193	Dpm1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
113333	ENSMUST00000142482	Dpm1-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse
98000	ENSMUST00000099072	Dpm1-201	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

48579

ATG...

MEA...

ATG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping
ncRNA

Liver, E14, Testis,
BMDC, Brain, MEF,
Neutrophil, v6-5, B_cell,
3T3, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15178	ENSMUST00000156800	Dpm1-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
50321	ENSMUST00000154111	Dpm1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse
98000	ENSMUST00000099072	Dpm1-201	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
113333	ENSMUST00000142482	Dpm1-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse
808774	ENSMUST00000150437	Dpm1-207	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
100432	ENSMUST00000109193	Dpm1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

97252

ATG...

MAL...

ATG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

3T3, Liver, Brain,
E14, R1E, Spleen_B_cell,
B_cell, MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	strong	4	sORFs_org_Mouse
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse

493385

105

CTG...

LPV...

CTG

Alternative
Downstream
NMD
sORF
InCDS
Overlapping

Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

109720

123

GTG...

VQS...

GTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

Brain, MEF, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

49216

TTG...

LPT...

TTG

Intronic
sORF
NMD
Alternative
InCDS
Overlapping

Liver, B_cell, Brain,
E14, MEF, NSC,
v6-5, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15178	ENSMUST00000156800	Dpm1-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
98000	ENSMUST00000099072	Dpm1-201	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

15457

CTG...

LLV...

CTG

NMD
sORF
Intronic
Alternative
InCDS
Overlapping

B_cell, E14, Neutrophil,
v6-5, BMDC, Liver,
Skin_tumor, Testis, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
98000	ENSMUST00000099072	Dpm1-201	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
15178	ENSMUST00000156800	Dpm1-210	retained_intron	Ribo-seq		4	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
113333	ENSMUST00000142482	Dpm1-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse

47168

GTG...

VDR...

GTG

CDS
NMD
sORF
Intronic

Brain, Liver, E14,
MEF, Testis, v6-5,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse
43862	ENSMUST00000136582	Dpm1-203	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
492425	ENSMUST00000141036	Dpm1-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

48951

ATG...

MME...

ATG

Intronic
sORF
ncRNA
NMD
Alternative
InCDS
Overlapping

v6-5, B_cell, Liver,
MEF, Brain, Neutrophil,
NSC, Testis, 3T3,
R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
113333	ENSMUST00000142482	Dpm1-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse
808774	ENSMUST00000150437	Dpm1-207	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
98000	ENSMUST00000099072	Dpm1-201	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
15178	ENSMUST00000156800	Dpm1-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
100432	ENSMUST00000109193	Dpm1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

98926

198

ATG...

MSI...

ATG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

Brain, E14, Glioma,
Liver, MEF, MESC,
NSC, v6-5, 3T3,
BMDC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse Johnstone2016
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
2270512	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	Johnstone2016
3069253	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

45055

TTG...

LFL...

TTG

InCDS
NMD
Overlapping
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

117440

ATG...

MLQ...

ATG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

B_cell, Brain, E14,
MEF, NSC, v6-5,
R1E, 3T3, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	3	sORFs_org_Mouse
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

105618

189

GTG...

VKT...

GTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

Brain, E14, NSC,
v6-5, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

46582

GTG...

VWL...

GTG

NMD
sORF
Intronic
Alternative
InCDS
Overlapping

B_cell, Brain, E14,
Neutrophil, v6-5, Liver,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
98000	ENSMUST00000099072	Dpm1-201	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
15178	ENSMUST00000156800	Dpm1-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

44741

CTG...

LEL...

CTG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping

MEF, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
808774	ENSMUST00000150437	Dpm1-207	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1208741

135

ATT...

III...

ATT

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

964520

141

ATT...

ILA...

ATT

Downstream
NMD
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

46511

CTG...

LLP...

CTG

NMD
sORF
Intronic
Alternative
InCDS
Overlapping

B_cell, Brain, E14,
MEF, NSC, v6-5,
Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
98000	ENSMUST00000099072	Dpm1-201	nonsense_mediated_decay	Ribo-seq		7	sORFs_org_Mouse
15178	ENSMUST00000156800	Dpm1-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

1725158

ATG...

MKR...

ATG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

Glioma, Liver, MEF,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

1212260

ATC...

IIY...

ATC

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

114933

222

CTG...

LPT...

CTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

Brain, E14, NSC,
v6-5, R1E, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

492424

TTG...

LGG...

TTG

Intronic
sORF
CDS
NMD

E14, MEF, v6-5,
Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43862	ENSMUST00000136582	Dpm1-203	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
492425	ENSMUST00000141036	Dpm1-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

108350

ATG...

MHR...

ATG

ncRNA
sORF
Alternative
Downstream
NMD
Upstream
Intronic

Brain, E14, Glioma,
Liver, MEF, MESC,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95368	ENSMUST00000139984	Adnp-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	moderate	1	Johnstone2016
1162055	ENSMUST00000131200	Adnp-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

735091

TTG...

LSG...

TTG

Alternative
Downstream
NMD
sORF
InCDS
Overlapping

MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1212137

156

ACG...

TGA...

ACG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1723169

GTG...

VSA...

GTG

Alternative
Downstream
NMD
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

498738

GTG...

VTL...

GTG

Alternative
Downstream
NMD
sORF

Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

96681

GTG...

VTL...

GTG

ncRNA
sORF
Alternative
Downstream
NMD
InCDS
Overlapping

Brain, MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95368	ENSMUST00000139984	Adnp-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1208926

TTG...

LSA...

TTG

Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1870664

300

TTG...

LFR...

TTG

Alternative
Downstream
NMD
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1214229

291

AGG...

RSS...

AGG

Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

45053

TTG...

LKR...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1212213

225

AAG...

KNS...

AAG

Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

46612

CTG...

LPL...

CTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Liver, Testis, B_cell,
Brain, E14, Neutrophil,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15178	ENSMUST00000156800	Dpm1-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
98000	ENSMUST00000099072	Dpm1-201	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse

101380

126

ATG...

MVQ...

ATG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

Brain, Glioma, Liver,
MEF, MESC, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse Johnstone2016
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
3069253	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
2270512	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	Johnstone2016

45529

ATG...

MES...

ATG

InCDS
Overlapping
sORF
NMD

Glioma, Liver, MEF,
MESC, R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
100432	ENSMUST00000109193	Dpm1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016
2270512	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	Johnstone2016

737234

ATG...

MHL...

ATG

Alternative
Downstream
NMD
sORF
InCDS
Overlapping

E14, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1167336

102

ATG...

MPE...

ATG

Alternative
Downstream
NMD
sORF
InCDS
Overlapping

R1E, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

48853

TTG...

LVF...

TTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

v6-5, Testis, Brain,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
113333	ENSMUST00000142482	Dpm1-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
98000	ENSMUST00000099072	Dpm1-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

1211525

AAG...

KDP...

AAG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

109534

252

GTG...

VLV...

GTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

3T3, R1E, Brain,
E14, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

44572

CTG...

LLR...

CTG

InCDS
NMD
Overlapping
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

97825

138

ATG...

MQI...

ATG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

3T3, Brain, B_cell,
E14, MEF, NSC,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

1723241

GTG...

VRT...

GTG

Alternative
Downstream
NMD
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

46806

255

GTG...

VQD...

GTG

Downstream
NMD
sORF

Brain, E14, R1E,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	4	sORFs_org_Mouse

111547

ATG...

MKL...

ATG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

Brain, MEF, Neutrophil,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse

1207253

TTG...

LKL...

TTG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

1207199

231

ATT...

IVN...

ATT

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

861274

114

CTG...

LRL...

CTG

InCDS
NMD
Overlapping
sORF
Intronic

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
50321	ENSMUST00000154111	Dpm1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
15178	ENSMUST00000156800	Dpm1-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

1210036

ATA...

IVL...

ATA

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1726134

TTG...

LTV...

TTG

Alternative
Downstream
NMD
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

1723387

TTG...

LMK...

TTG

Alternative
Downstream
NMD
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

49403

GTG...

VLL...

GTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

Liver, MEF, Testis,
B_cell, Brain, E14,
NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
98000	ENSMUST00000099072	Dpm1-201	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse
15178	ENSMUST00000156800	Dpm1-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1162250

CTG...

LKG...

CTG

CDS
NMD
sORF
Intronic

Liver, E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
43862	ENSMUST00000136582	Dpm1-203	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

47808

CTG...

LPT...

CTG

InCDS
Overlapping
sORF
NMD

R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
100432	ENSMUST00000109193	Dpm1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1209667

138

TTG...

LAR...

TTG

Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

115282

180

TTG...

LKI...

TTG

Alternative
Downstream
NMD
sORF
InCDS
Overlapping

E14, R1E, 3T3,
Brain, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse
93056	ENSMUST00000088001	Adnp-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
95066	ENSMUST00000057793	Adnp-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

1209414

231

ATG...

MHS...

ATG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

48414

CTG...

LRP...

CTG

InCDS
NMD
Overlapping
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

861237

117

TTG...

LLR...

TTG

InCDS
NMD
Overlapping
sORF
Intronic

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
15178	ENSMUST00000156800	Dpm1-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
50321	ENSMUST00000154111	Dpm1-209	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

47910

TTG...

LIL...

TTG

Alternative
InCDS
NMD
Overlapping
sORF
ncRNA

Testis, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
808774	ENSMUST00000150437	Dpm1-207	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

1210206

AAG...

KGN...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1213218

207

GTG...

VKP...

GTG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1214034

294

ACG...

TNQ...

ACG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1876658

291

TTG...

LFF...

TTG

Alternative
Downstream
NMD
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
44573	ENSMUST00000138667	Gm20716-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

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