Gene Gm43079 | MetamORF

Gene

ID CARD

Gm43079

Aliases

Gm43079

Chromosome

Transcripts

23 ORFs
1 known transcript
23 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

52216

ENSMUST00000199794

Gm43079-201

antisense_RNA

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1423997	75	TTG ...	LAN ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Overlapping sORF	R1E
1218701	72	AAG ...	KKV ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Overlapping sORF	E14
54532	126	CTG ...	LVL ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Overlapping sORF	3T3, E14, Neutrophil, R1E, Testis
1373962	132	CTG ...	LSS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Overlapping sORF	E14
1219124	33	AGG ...	RNH ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Overlapping sORF	E14
137511	63	CTG ...	LCC ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Overlapping sORF	3T3, E14, MEF, NSC, R1E
138239	33	TTG ...	LRP ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Overlapping sORF	E14, MEF, R1E
1220859	117	AAG ...	KRV ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Overlapping sORF	E14
131838	66	CTG ...	LLC ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Overlapping sORF	3T3, MEF, NSC, R1E
134801	78	CTG ...	LLA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Overlapping sORF	E14, R1E
130159	87	CTG ...	LDE ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Overlapping sORF	3T3, E14, Neutrophil, R1E
129910	57	GTG ...	VEA ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Overlapping sORF	Brain, E14, MEF, R1E, v6-5
128691	30	TTG ...	LGS ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Overlapping sORF	3T3, MEF, Neutrophil, R1E, v6-5
1221448	69	ATA ...	ISV ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Overlapping sORF	E14
129978	36	CTG ...	LLR ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Overlapping sORF	E14, MEF
17043	69	CTG ...	LSR ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Overlapping sORF	3T3, E14, Neutrophil, R1E
52215	123	GTG ...	VLK ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Overlapping sORF	3T3, E14, Neutrophil, R1E, Testis
1220152	45	AAG ...	KRA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Overlapping sORF	E14
1222827	72	AAG ...	KLI ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Overlapping sORF	E14
130470	90	TTG ...	LYG ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Overlapping sORF	3T3, E14, Neutrophil, R1E
128780	66	GTG ...	VSR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Overlapping sORF	E14, Neutrophil, R1E
1647437	57	CTG ...	LCG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Overlapping sORF	MEF
53422	72	GTG ...	VLS ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Overlapping sORF	3T3, E14, Neutrophil, R1E, Testis

ORFs

23 ORFs
1 known transcript
23 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

54532

126

CTG...

LVL...

CTG

Intronic
sORF
Overlapping

Brain, Liver, 3T3,
E14, Neutrophil, R1E,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
17044	ENSMUST00000198050	Acad9-208	retained_intron	Ribo-seq		1	sORFs_org_Mouse
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		6	sORFs_org_Mouse

1423997

TTG...

LAN...

TTG

Overlapping
sORF
Intronic

R1E, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		1	sORFs_org_Mouse
17044	ENSMUST00000198050	Acad9-208	retained_intron	Ribo-seq		1	sORFs_org_Mouse

53422

GTG...

VLS...

GTG

Intronic
sORF
Overlapping

Brain, Liver, 3T3,
E14, Neutrophil, R1E,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
17044	ENSMUST00000198050	Acad9-208	retained_intron	Ribo-seq		1	sORFs_org_Mouse
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		5	sORFs_org_Mouse

1218701

AAG...

KKV...

AAG

Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		1	sORFs_org_Mouse

128780

GTG...

VSR...

GTG

Intronic
sORF
Overlapping

Brain, B_cell, E14,
Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
17044	ENSMUST00000198050	Acad9-208	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		3	sORFs_org_Mouse

1373962

132

CTG...

LSS...

CTG

Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		1	sORFs_org_Mouse

1219124

AGG...

RNH...

AGG

Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		1	sORFs_org_Mouse

130159

CTG...

LDE...

CTG

Intronic
sORF
Overlapping

Brain, 3T3, E14,
Neutrophil, R1E, B_cell,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		4	sORFs_org_Mouse
17044	ENSMUST00000198050	Acad9-208	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

128691

TTG...

LGS...

TTG

Intronic
sORF
Overlapping
Alternative
InCDS

MEF, Brain, 3T3,
Neutrophil, R1E, v6-5,
NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52242	ENSMUST00000198987	Acad9-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		6	sORFs_org_Mouse
132246	ENSMUST00000011492	Acad9-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

137511

CTG...

LCC...

CTG

Overlapping
sORF
Intronic

3T3, E14, MEF,
NSC, R1E, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		5	sORFs_org_Mouse
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

138239

TTG...

LRP...

TTG

Overlapping
sORF
Intronic

E14, MEF, R1E,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		4	sORFs_org_Mouse
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

17043

CTG...

LSR...

CTG

Intronic
sORF
Overlapping

Brain, Liver, Skin_tumor,
3T3, E14, Neutrophil,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
17044	ENSMUST00000198050	Acad9-208	retained_intron	Ribo-seq		2	sORFs_org_Mouse
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		4	sORFs_org_Mouse

1220859

117

AAG...

KRV...

AAG

Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		1	sORFs_org_Mouse

131838

CTG...

LLC...

CTG

Overlapping
sORF
Intronic

3T3, MEF, NSC,
R1E, Brain, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		4	sORFs_org_Mouse
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
17044	ENSMUST00000198050	Acad9-208	retained_intron	Ribo-seq		1	sORFs_org_Mouse

134801

CTG...

LLA...

CTG

Overlapping
sORF
Intronic

E14, R1E, Liver,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		2	sORFs_org_Mouse
17044	ENSMUST00000198050	Acad9-208	retained_intron	Ribo-seq		1	sORFs_org_Mouse
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

52215

123

GTG...

VLK...

GTG

Intronic
sORF
Overlapping

Liver, Brain, 3T3,
E14, Neutrophil, R1E,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17044	ENSMUST00000198050	Acad9-208	retained_intron	Ribo-seq		1	sORFs_org_Mouse
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		5	sORFs_org_Mouse

129910

GTG...

VEA...

GTG

Intronic
sORF
Overlapping

Liver, Brain, E14,
MEF, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17044	ENSMUST00000198050	Acad9-208	retained_intron	Ribo-seq		1	sORFs_org_Mouse
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		5	sORFs_org_Mouse
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1221448

ATA...

ISV...

ATA

Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		1	sORFs_org_Mouse

130470

TTG...

LYG...

TTG

Intronic
sORF
Overlapping

Liver, Brain, 3T3,
E14, Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17044	ENSMUST00000198050	Acad9-208	retained_intron	Ribo-seq		1	sORFs_org_Mouse
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		4	sORFs_org_Mouse

129978

CTG...

LLR...

CTG

Overlapping
sORF
Intronic

E14, MEF, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		3	sORFs_org_Mouse
128692	ENSMUST00000195896	Acad9-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1220152

AAG...

KRA...

AAG

Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		1	sORFs_org_Mouse

1222827

AAG...

KLI...

AAG

Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		1	sORFs_org_Mouse

1647437

CTG...

LCG...

CTG

Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52216	ENSMUST00000199794	Gm43079-201	antisense_RNA	Ribo-seq		1	sORFs_org_Mouse

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