Gene Gm20427 | MetamORF

Gene

ID CARD

Gm20427

Aliases

Gm20427

Chromosome

Transcripts

59 ORFs
1 known transcript
59 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

385544

ENSMUST00000168978

Gm20427-201

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1047463	45	CTG ...	LAW ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Neutrophil
379642	75	TTG ...	LCP ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	B_cell
386579	48	ATG ...	MSF ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	B_cell
37828	171	GTG ...	VGL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Neutrophil
383564	81	CTG ...	LSL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	B_cell
385543	195	GTG ...	VDS ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
481715	237	TTG ...	LAG ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	Liver
796394	90	GTG ...	VRG ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, E14, Neutrophil
1193036	60	AGG ...	RHL ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
702304	54	CTG ...	LLL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Neutrophil
480538	105	GTG ...	VGG ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Neutrophil
479714	63	TTG ...	LEV ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	E14, Liver
479814	93	TTG ...	LRE ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Intronic sORF	Liver, v6-5
480105	183	GTG ...	VAG ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Intronic sORF	Liver
36447	75	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	v6-5
36842	132	GTG ...	VVE ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Liver, Neutrophil, v6-5
37602	57	TTG ...	LGM ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Neutrophil
1149818	60	CTG ...	LWG ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	v6-5
478974	153	CTG ...	LPF ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Liver, v6-5
38246	75	CTG ...	LHP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Neutrophil
382882	216	ATG ...	MKA ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
383343	66	GTG ...	VRA ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	B_cell
1193468	30	GTG ...	VLP ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
1193897	66	ACG ...	TAL ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Intronic sORF	E14
1193419	72	AGG ...	RKR ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
980416	57	CTG ...	LLF ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Liver
383521	96	TTG ...	LRK ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Neutrophil
38605	135	GTG ...	VLF ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	v6-5
479603	36	GTG ...	VGH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Neutrophil
481383	108	GTG ...	VLP ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	Liver, v6-5
1190090	177	ACG ...	TRA ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Intronic sORF	E14
482001	66	CTG ...	LLE ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Liver
481794	105	CTG ...	LPE ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Liver, v6-5
1193447	183	ATA ...	IET ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Intronic sORF	E14
37024	60	GTG ...	VLG ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	E14, Neutrophil
482092	75	CTG ...	LQS ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	E14, Liver, v6-5
36668	165	CTG ...	LWV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Neutrophil
481624	114	GTG ...	VSV ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	E14, Liver, v6-5
36219	51	ATG ...	MRW ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	E14, Neutrophil
1192345	291	ATG ...	MDT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	E14
37910	117	GTG ...	VRH ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Neutrophil
481681	255	GTG ...	VTA ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Liver
1191795	69	AGG ...	RHA ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Intronic sORF	E14
1194300	72	AGG ...	RRT ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
1193309	45	ACG ...	TVW ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
478667	45	CTG ...	LGG ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Liver
36999	129	GTG ...	VEK ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Liver, Neutrophil, v6-5
384813	102	ATG ...	MDM ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Intronic sORF	E14
1191665	102	ATC ...	IPE ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Intronic sORF	E14
36849	162	GTG ...	VLI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	E14
36371	174	CTG ...	LGA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	v6-5
1150088	33	TTG ...	LSP ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	v6-5
380289	96	ATG ...	MPI ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
1190377	48	AGG ...	RDP ...	Ribo-seq	AGG	strong	1	sORFs_org_Mouse	Intronic sORF	E14
708363	51	CTG ...	LLP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	E14, Neutrophil
479039	51	GTG ...	VKP ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Liver, Neutrophil
383662	75	ATG ...	MGL ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Intronic sORF	E14
36223	108	GTG ...	VKG ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	E14, Liver, Neutrophil, v6-5
481189	264	CTG ...	LQL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Liver

ORFs

59 ORFs
1 known transcript
59 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

1047463

CTG...

LAW...

CTG

Intronic
sORF
ncRNA

Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
379544	ENSMUST00000173810	Slc39a7-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

36219

ATG...

MRW...

ATG

ncRNA
sORF
Intronic
Alternative
Upstream

MEF, v6-5, E14,
Neutrophil, BMDC, Spleen_B_cell,
Testis, 3T3, B_cell,
Glioma, Liver, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379544	ENSMUST00000173810	Slc39a7-206	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
388992	ENSMUST00000025186	Slc39a7-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse Johnstone2016

36999

129

GTG...

VEK...

GTG

Intronic
sORF

R1E, Spleen_B_cell, Testis,
Liver, Neutrophil, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38090	ENSMUST00000167145	Slc39a7-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		3	sORFs_org_Mouse

382882

216

ATG...

MKA...

ATG

sORF
Alternative
InCDS
Overlapping
Intronic
ncRNA

Liver, 3T3, Brain,
E14, BMDC, Spleen_B_cell,
NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
799502	ENSMUST00000171872	Slc39a7-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
388992	ENSMUST00000025186	Slc39a7-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
380944	ENSMUST00000169397	Slc39a7-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
379544	ENSMUST00000173810	Slc39a7-206	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

379642

TTG...

LCP...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping

B_cell, R1E, Liver,
Brain, Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
483051	ENSMUST00000045467	H2-Ke6-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
389684	ENSMUST00000114303	H2-Ke6-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
379643	ENSMUST00000173894	H2-Ke6-206	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
379604	ENSMUST00000170644	H2-Ke6-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

383564

CTG...

LSL...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

Brain, Spleen_B_cell, B_cell,
Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379643	ENSMUST00000173894	H2-Ke6-206	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
389684	ENSMUST00000114303	H2-Ke6-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
483051	ENSMUST00000045467	H2-Ke6-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

386579

ATG...

MSF...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

B_cell, Brain, Spleen_B_cell,
Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
379643	ENSMUST00000173894	H2-Ke6-206	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
389684	ENSMUST00000114303	H2-Ke6-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
483051	ENSMUST00000045467	H2-Ke6-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

37828

171

GTG...

VGL...

GTG

Intronic
sORF

Liver, Neutrophil, R1E,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
38090	ENSMUST00000167145	Slc39a7-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

38246

CTG...

LHP...

CTG

ncRNA
sORF
Intronic
Alternative
Upstream

Brain, MEF, v6-5,
Neutrophil, B_cell, BMDC,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379544	ENSMUST00000173810	Slc39a7-206	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse
388992	ENSMUST00000025186	Slc39a7-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

385543

195

GTG...

VDS...

GTG

Intronic
sORF

Brain, Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

481715

237

TTG...

LAG...

TTG

Intronic
sORF

Liver, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

796394

GTG...

VRG...

GTG

Intronic
sORF
ncRNA

B_cell, E14, Neutrophil,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		3	sORFs_org_Mouse
379544	ENSMUST00000173810	Slc39a7-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1193036

AGG...

RHL...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

478974

153

CTG...

LPF...

CTG

Intronic
sORF

Brain, Spleen_B_cell, Liver,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

702304

CTG...

LLL...

CTG

Intronic
sORF
Alternative
Upstream

Neutrophil, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse
388992	ENSMUST00000025186	Slc39a7-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

480538

105

GTG...

VGG...

GTG

Intronic
sORF

Liver, Neutrophil, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

482001

CTG...

LLE...

CTG

Intronic
sORF

Spleen_B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

478667

CTG...

LGG...

CTG

Intronic
sORF

Spleen_B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

479714

TTG...

LEV...

TTG

Intronic
sORF

E14, Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

36371

174

CTG...

LGA...

CTG

Intronic
sORF

R1E, Brain, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38090	ENSMUST00000167145	Slc39a7-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

479814

TTG...

LRE...

TTG

Intronic
sORF

Liver, v6-5, Brain,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

480105

183

GTG...

VAG...

GTG

Intronic
sORF

Liver, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

36447

CTG...

LLS...

CTG

Intronic
sORF

v6-5, Liver, R1E,
Brain, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse
38090	ENSMUST00000167145	Slc39a7-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

383521

TTG...

LRK...

TTG

Intronic
sORF

Brain, Spleen_B_cell, Liver,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse

36842

132

GTG...

VVE...

GTG

Intronic
sORF

Liver, Neutrophil, v6-5,
Spleen_B_cell, Testis, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		3	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse
38090	ENSMUST00000167145	Slc39a7-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

37602

TTG...

LGM...

TTG

Intronic
sORF
Alternative
Upstream
ncRNA

B_cell, Neutrophil, Spleen_B_cell,
Testis, 3T3, BMDC,
MEF, v6-5, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
388992	ENSMUST00000025186	Slc39a7-201	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse
379544	ENSMUST00000173810	Slc39a7-206	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

1149818

CTG...

LWG...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

v6-5, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
388992	ENSMUST00000025186	Slc39a7-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

383343

GTG...

VRA...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping

B_cell, Liver, 3T3,
Brain, Spleen_B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
389684	ENSMUST00000114303	H2-Ke6-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
379604	ENSMUST00000170644	H2-Ke6-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
379643	ENSMUST00000173894	H2-Ke6-206	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
483051	ENSMUST00000045467	H2-Ke6-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1193468

GTG...

VLP...

GTG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

1150088

TTG...

LSP...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
388992	ENSMUST00000025186	Slc39a7-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1193897

ACG...

TAL...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1193419

AGG...

RKR...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

980416

CTG...

LLF...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
483051	ENSMUST00000045467	H2-Ke6-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

38605

135

GTG...

VLF...

GTG

Intronic
sORF

v6-5, Neutrophil, R1E,
Brain, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse
38090	ENSMUST00000167145	Slc39a7-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

479603

GTG...

VGH...

GTG

Intronic
sORF
Alternative
Upstream

Neutrophil, Spleen_B_cell, B_cell,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
388992	ENSMUST00000025186	Slc39a7-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

384813

102

ATG...

MDM...

ATG

Alternative
InCDS
Overlapping
sORF
ncRNA
Intronic

3T3, MEF, E14,
R1E, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
388992	ENSMUST00000025186	Slc39a7-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
379544	ENSMUST00000173810	Slc39a7-206	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
380944	ENSMUST00000169397	Slc39a7-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

36668

165

CTG...

LWV...

CTG

Intronic
sORF

R1E, Liver, Neutrophil,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38090	ENSMUST00000167145	Slc39a7-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

481383

108

GTG...

VLP...

GTG

Intronic
sORF

Liver, v6-5, Brain,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

37024

GTG...

VLG...

GTG

ncRNA
sORF
Intronic
Alternative
Upstream

Brain, MEF, v6-5,
BMDC, Spleen_B_cell, Testis,
E14, Neutrophil, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379544	ENSMUST00000173810	Slc39a7-206	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
388992	ENSMUST00000025186	Slc39a7-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

1190090

177

ACG...

TRA...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

380289

ATG...

MPI...

ATG

ncRNA
sORF
Alternative
InCDS
Overlapping
Intronic

Brain, E14, R1E,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379544	ENSMUST00000173810	Slc39a7-206	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
388992	ENSMUST00000025186	Slc39a7-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

37910

117

GTG...

VRH...

GTG

Intronic
sORF

Spleen_B_cell, Testis, Liver,
Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse
38090	ENSMUST00000167145	Slc39a7-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

481794

105

CTG...

LPE...

CTG

Intronic
sORF

Liver, v6-5, Brain,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

1193447

183

ATA...

IET...

ATA

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

482092

CTG...

LQS...

CTG

Intronic
sORF

E14, Liver, v6-5,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

383662

ATG...

MGL...

ATG

ncRNA
sORF
Intronic
Alternative
InCDS
Overlapping

R1E, E14, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379544	ENSMUST00000173810	Slc39a7-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
380944	ENSMUST00000169397	Slc39a7-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

481624

114

GTG...

VSV...

GTG

Intronic
sORF

E14, Liver, v6-5,
Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

1192345

291

ATG...

MDT...

ATG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

36223

108

GTG...

VKG...

GTG

Intronic
sORF

Spleen_B_cell, Testis, R1E,
E14, Liver, Neutrophil,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse
38090	ENSMUST00000167145	Slc39a7-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		4	sORFs_org_Mouse

481681

255

GTG...

VTA...

GTG

Intronic
sORF

Liver, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

1191795

AGG...

RHA...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

479039

GTG...

VKP...

GTG

Intronic
sORF

Spleen_B_cell, Liver, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1194300

AGG...

RRT...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1193309

ACG...

TVW...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1191665

102

ATC...

IPE...

ATC

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse

36849

162

GTG...

VLI...

GTG

Intronic
sORF

E14, Brain, Testis,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse
38090	ENSMUST00000167145	Slc39a7-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

708363

CTG...

LLP...

CTG

Alternative
sORF
Upstream
Intronic

3T3, E14, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
388992	ENSMUST00000025186	Slc39a7-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1190377

AGG...

RDP...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

481189

264

CTG...

LQL...

CTG

Intronic
sORF

Brain, Spleen_B_cell, v6-5,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36008	ENSMUST00000170491	Slc39a7-204	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
385544	ENSMUST00000168978	Gm20427-201	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

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