Metam
ORF

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Gene

Gene

ID CARD

ID

HGNC:4396

Aliases

ENSG00000078369
GNB1, HGNC:4396, NCBI:2782
OFF:GNB1

Chromosome

1

Transcripts

139 ORFs
3 known transcripts
134 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

2519 ENST00000615252 GNB1-210 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

994152 123

TTG ...

LLL ...

Ribo-seq
TTG

3 sORFs_org_Human
    Overlapping
    sORF
    Upstream
Brain, HEK293, hES
78859 108

ATG ...

MTI ...

Ribo-seq
ATG

32 sORFs_org_Human
Johnstone2016
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Brain_tumor, Flp-In_T-REx-293, HAP1,
HEK293, HEK293T, HeLa,
hES, HFF, Jurkat,
LCL, loayza_puch_2016, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
917727 45

GCC ...

ASR ...

Ribo-seq
GCC

weak

1 sORFs_org_Human
    InCDS
    Overlapping
    sORF
Jurkat
1833694 81

CTG ...

LFC ...

Ribo-seq
CTG

moderate

1 sORFs_org_Human
    Alternative
    Downstream
    sORF
HeLa
231519 126

CTG ...

LSA ...

Ribo-seq
CTG

15 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, Flp-In_T-REx-293, HAP1,
HEK293, HeLa, hES,
LCL, RPE-1, THP-1
232135 81

GTG ...

VGA ...

Ribo-seq
GTG

27 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, Blood, Flp-In_T-REx-293,
guo_2014, HAP1, HEK293,
HEK293T, HeLa, hES,
LCL, loayza_puch_2016, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1, U2OS
1833276 177

CTG ...

LDL ...

Ribo-seq
CTG

strong

1 sORFs_org_Human
    Downstream
    sORF
HeLa
174301 78

GTG ...

VWA ...

Ribo-seq
GTG

36 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, Blood, Brain,
Breast, Flp-In_T-REx-293, guo_2014,
HAP1, HCT116, HEK293,
HEK293T, HeLa, hES,
HFF, Jurkat, LCL,
loayza_puch_2016, MDA-MB-231, MM1S,
Monocyte, RPE-1, THP-1,
U2OS
2611860 111

TGG ...

WMT ...

Ribo-seq
TGG

2 sORFs_org_Human
    InCDS
    Overlapping
    sORF
HeLa, THP-1
1833318 63

GTG ...

VAS ...

Ribo-seq
GTG

strong

1 sORFs_org_Human
    Alternative
    Downstream
    sORF
HeLa
105732 33

ATG ...

MYW ...

Ribo-seq
ATG

weak

32 sORFs_org_Human
Johnstone2016
    Alternative
    sORF
    Upstream
BJ, Blood, Brain,
Brain_tumor, Flp-In_T-REx-293, guo_2014,
HAP1, HEK293, HEK293T,
HeLa, hES, HFF,
LCL, loayza_puch_2016, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1, U2OS
2617647 51

CAG ...

QGP ...

Ribo-seq
CAG

2 sORFs_org_Human
    Alternative
    Downstream
    Overlapping
    sORF
HeLa, THP-1
920090 39

ATT ...

IYM ...

Ribo-seq
ATT

weak

1 sORFs_org_Human
    Alternative
    sORF
    Upstream
Jurkat
78823 174

ATG ...

MLQ ...

Ribo-seq
ATG

27 sORFs_org_Human
Johnstone2016
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Brain_tumor, Flp-In_T-REx-293, HAP1,
HEK293, HEK293T, HeLa,
hES, HFF, LCL,
MDA-MB-231, MM1S, Monocyte,
RPE-1, THP-1
3981 36

GTG ...

VAW ...

Ribo-seq
GTG

strong

24 sORFs_org_Human
    InCDS
    Overlapping
    sORF
Blood, Brain, Flp-In_T-REx-293,
HAP1, HEK293, HeLa,
hES, HFF, Jurkat,
LCL, MDA-MB-231, MM1S,
RPE-1, THP-1
2985 30

TTG ...

LTF ...

Ribo-seq
TTG

weak

28 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1
917291 33

TGG ...

WLR ...

Ribo-seq
TGG

weak

3 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
HeLa, Jurkat, THP-1
78831 207

CTG ...

LTP ...

Ribo-seq
CTG

27 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
78866 195

ATG ...

MRL ...

Ribo-seq
ATG

18 sORFs_org_Human
    InCDS
    Overlapping
    sORF
Brain, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MM1S,
THP-1
78805 138

CTG ...

LSP ...

Ribo-seq
CTG

26 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
78833 213

TTG ...

LLL ...

Ribo-seq
TTG

27 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
917569 108

TCG ...

SSL ...

Ribo-seq
TCG

1 sORFs_org_Human
    InCDS
    Overlapping
    sORF
Jurkat
78819 120

CTG ...

LAT ...

Ribo-seq
CTG

26 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
1833432 57

CTG ...

LLC ...

Ribo-seq
CTG

weak

1 sORFs_org_Human
    Alternative
    Downstream
    sORF
HeLa
174305 219

GTG ...

VGS ...

Ribo-seq
GTG

23 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HeLa,
hES, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1, U2OS
3241 102

CTG ...

LVL ...

Ribo-seq
CTG

27 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
636909 240

CTG ...

LEA ...

Ribo-seq
CTG

moderate

8 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, hES, loayza_puch_2016,
MM1S, RPE-1, THP-1
229878 120

ATG ...

MAW ...

Ribo-seq
ATG

6 sORFs_org_Human
Johnstone2016
    Alternative
    Downstream
    Overlapping
    sORF
Brain, Brain_tumor, HEK293,
HeLa, hES, HFF,
LCL
4138 66

ATG ...

MPL ...

Ribo-seq
ATG

weak

30 sORFs_org_Human
Johnstone2016
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Brain_tumor, Flp-In_T-REx-293, HAP1,
HEK293, HEK293T, HeLa,
hES, HFF, Jurkat,
LCL, MDA-MB-231, MM1S,
Monocyte, RPE-1, THP-1
3091 66

TTG ...

LPL ...

Ribo-seq
TTG

weak

28 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
413289 42

ACC ...

TRF ...

Ribo-seq
ACC

1 sORFs_org_Human
    Alternative
    sORF
    Upstream
HCT116
413332 72

AGT ...

SYG ...

Ribo-seq
AGT

5 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, HCT116, HEK293,
Jurkat
105449 45

ATG ...

MVN ...

Ribo-seq
ATG

8 sORFs_org_Human
    sORF
    Upstream
Brain, HAP1, HEK293,
hES, LCL
2549 75

CTG ...

LTM ...

Ribo-seq
CTG

25 sORFs_org_Human
    Alternative
    Downstream
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
RPE-1, THP-1, U2OS
536666 180

GTG ...

VGS ...

Ribo-seq
GTG

19 sORFs_org_Human
    sORF
    Upstream
BJ, Blood, HAP1,
HEK293, HeLa, hES,
loayza_puch_2016, MDA-MB-231, MM1S,
RPE-1, THP-1, U2OS
105697 39

TTG ...

LKV ...

Ribo-seq
TTG

weak

28 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, loayza_puch_2016, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
295423 39

GTG ...

VWA ...

Ribo-seq
GTG

34 sORFs_org_Human
    sORF
    Upstream
BJ, Blood, Breast,
Flp-In_T-REx-293, guo_2014, HAP1,
HCT116, HEK293, HEK293T,
HeLa, hES, HFF,
Jurkat, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, Monocyte,
RPE-1, THP-1, U2OS
863590 96

TCG ...

SSP ...

Ribo-seq
TCG

1 sORFs_org_Human
    InCDS
    Overlapping
    sORF
Jurkat
78829 186

CTG ...

LVL ...

Ribo-seq
CTG

26 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
3237 99

GTG ...

VLV ...

Ribo-seq
GTG

27 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1
4303 63

CTG ...

LGH ...

Ribo-seq
CTG

moderate

24 sORFs_org_Human
    Alternative
    Overlapping
    sORF
    Upstream
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
78825 177

GTG ...

VML ...

Ribo-seq
GTG

26 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
295067 33

TTG ...

LET ...

Ribo-seq
TTG

strong

30 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, Blood, Flp-In_T-REx-293,
guo_2014, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, Monocyte,
RPE-1, THP-1, U2OS
1520687 291

GTG ...

VGF ...

Ribo-seq
GTG

moderate

3 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, MM1S
1833708 102

TTG ...

LNF ...

Ribo-seq
TTG

weak

1 sORFs_org_Human
    Alternative
    Downstream
    sORF
HeLa
229876 111

CTG ...

LWR ...

Ribo-seq
CTG

4 sORFs_org_Human
    Alternative
    Downstream
    Overlapping
    sORF
Brain, HeLa, hES,
LCL
79090 78

ATG ...

MVN ...

Ribo-seq
ATG

13 sORFs_org_Human
Johnstone2016
    Overlapping
    sORF
    Upstream
BJ, Brain, Brain_tumor,
HAP1, HEK293, HEK293T,
HeLa, hES, HFF,
MDA-MB-231, RPE-1
1833418 30

CTG ...

LLQ ...

Ribo-seq
CTG

moderate

1 sORFs_org_Human
    Downstream
    sORF
HeLa
1833264 153

ATG ...

MKP ...

Ribo-seq
ATG

weak

1 sORFs_org_Human
    Downstream
    sORF
HeLa
174303 177

CTG ...

LDR ...

Ribo-seq
CTG

28 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, Blood, Brain,
Flp-In_T-REx-293, guo_2014, HAP1,
HEK293, HEK293T, HeLa,
hES, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1, U2OS
917079 93

CTG ...

LQR ...

Ribo-seq
CTG

1 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
Jurkat
3057 60

CTG ...

LAQ ...

Ribo-seq
CTG

moderate

27 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
78821 153

ATG ...

MCE ...

Ribo-seq
ATG

25 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
1833841 78

GTG ...

VDA ...

Ribo-seq
GTG

moderate

1 sORFs_org_Human
    Alternative
    Downstream
    sORF
HeLa
3256 123

CTG ...

LTP ...

Ribo-seq
CTG

26 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
444765 90

ACT ...

TST ...

Ribo-seq
ACT

1 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
HCT116
2511703 132

CTG ...

LIG ...

Ribo-seq
CTG

2 sORFs_org_Human
    Overlapping
    sORF
    Upstream
HEK293, hES
1833809 30

ATG ...

MRA ...

Ribo-seq
ATG

moderate

1 sORFs_org_Human
    Alternative
    Downstream
    sORF
HeLa
2655 45

GTG ...

VSW ...

Ribo-seq
GTG

weak

23 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
2634 36

CTG ...

LGM ...

Ribo-seq
CTG

moderate

24 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
917855 30

CTC ...

LWR ...

Ribo-seq
CTC

4 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
HEK293, HeLa, Jurkat,
THP-1
105683 33

GTG ...

VAL ...

Ribo-seq
GTG

strong

28 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, loayza_puch_2016, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
78857 84

CTG ...

LET ...

Ribo-seq
CTG

31 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1, U2OS
78827 183

GTG ...

VLV ...

Ribo-seq
GTG

26 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
2518 60

CTG ...

LWR ...

Ribo-seq
CTG

21 sORFs_org_Human
    Alternative
    Downstream
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, RPE-1,
THP-1
1833241 81

TTG ...

LYL ...

Ribo-seq
TTG

weak

1 sORFs_org_Human
    Downstream
    sORF
HeLa
4203 72

GTG ...

VHM ...

Ribo-seq
GTG

weak

26 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
232142 108

CTG ...

LPS ...

Ribo-seq
CTG

25 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HEK293T,
HeLa, hES, LCL,
loayza_puch_2016, MDA-MB-231, MM1S,
RPE-1, THP-1, U2OS
79094 117

TTG ...

LSV ...

Ribo-seq
TTG

4 sORFs_org_Human
    Overlapping
    sORF
    Upstream
Brain, HEK293, hES
3101 78

ATG ...

MAM ...

Ribo-seq
ATG

moderate

27 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
3265 129

TTG ...

LLL ...

Ribo-seq
TTG

27 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
1833725 108

GTG ...

VYL ...

Ribo-seq
GTG

weak

1 sORFs_org_Human
    Alternative
    Downstream
    sORF
HeLa
917512 72

GGG ...

GMC ...

Ribo-seq
GGG

1 sORFs_org_Human
    InCDS
    Overlapping
    sORF
Jurkat
3212 69

ATG ...

MCE ...

Ribo-seq
ATG

24 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, RPE-1, THP-1
78803 105

TTG ...

LLG ...

Ribo-seq
TTG

26 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
78807 165

ATG ...

MTT ...

Ribo-seq
ATG

27 sORFs_org_Human
Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Brain_tumor, Flp-In_T-REx-293, HAP1,
HEK293, HEK293T, HeLa,
hES, HFF, LCL,
MDA-MB-231, MM1S, RPE-1,
THP-1
2601 30

ATG ...

MTT ...

Ribo-seq
ATG

moderate

25 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
3222 54

CTG ...

LGC ...

Ribo-seq
CTG

strong

26 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
2528 69

ATG ...

MAW ...

Ribo-seq
ATG

25 sORFs_org_Human
    Alternative
    Downstream
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
RPE-1, THP-1, U2OS
294823 84

GTG ...

VSL ...

Ribo-seq
GTG

8 sORFs_org_Human
    Alternative
    sORF
    Upstream
HAP1, HEK293, HeLa,
hES, LCL, MDA-MB-231
917800 75

CAT ...

HRD ...

Ribo-seq
CAT

moderate

1 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
Jurkat
1833295 201

CTG ...

LCC ...

Ribo-seq
CTG

moderate

1 sORFs_org_Human
    Downstream
    sORF
HeLa
919707 63

AGG ...

RRP ...

Ribo-seq
AGG

1 sORFs_org_Human
    Alternative
    sORF
    Upstream
Jurkat
79092 90

GTG ...

VPR ...

Ribo-seq
GTG

16 sORFs_org_Human
    Overlapping
    sORF
    Upstream
BJ, Brain, HAP1,
HEK293, HEK293T, HeLa,
hES, HFF, LCL,
MDA-MB-231, RPE-1, THP-1
78772 69

ATG ...

MHS ...

Ribo-seq
ATG

24 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
4263 51

CTG ...

LCI ...

Ribo-seq
CTG

moderate

25 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
RPE-1, THP-1, U2OS
413376 36

GTA ...

VLE ...

Ribo-seq
GTA

weak

5 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, HCT116, HEK293,
Jurkat
920348 123

CCG ...

PAR ...

Ribo-seq
CCG

1 sORFs_org_Human
    sORF
    Upstream
Jurkat
3187 33

GTG ...

VPA ...

Ribo-seq
GTG

weak

27 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
916913 72

ACG ...

TMA ...

Ribo-seq
ACG

1 sORFs_org_Human
    Alternative
    Downstream
    Overlapping
    sORF
Jurkat
918718 39

CCC ...

PFW ...

Ribo-seq
CCC

weak

1 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
Jurkat
920434 132

TGG ...

WTE ...

Ribo-seq
TGG

moderate

1 sORFs_org_Human
    Alternative
    sORF
    Upstream
Jurkat
1209338 78

TTG ...

LTS ...

Ribo-seq
TTG

8 sORFs_org_Human
    Alternative
    sORF
    Upstream
HAP1, HEK293, HeLa,
hES, HFF
4113 57

CTG ...

LGT ...

Ribo-seq
CTG

moderate

25 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, MM1S,
Monocyte, RPE-1, THP-1
231517 99

CTG ...

LFV ...

Ribo-seq
CTG

22 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HEK293T,
HeLa, hES, LCL,
MDA-MB-231, MM1S, RPE-1,
THP-1
1833305 42

CTG ...

LQH ...

Ribo-seq
CTG

weak

1 sORFs_org_Human
    Alternative
    Downstream
    sORF
HeLa
3185 36

CTG ...

LAT ...

Ribo-seq
CTG

24 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, Monocyte,
RPE-1, THP-1
229880 126

CTG ...

LTM ...

Ribo-seq
CTG

7 sORFs_org_Human
    Alternative
    Downstream
    Overlapping
    sORF
BJ, Brain, Flp-In_T-REx-293,
HeLa, hES, HFF,
LCL
4455 57

GTG ...

VPR ...

Ribo-seq
GTG

14 sORFs_org_Human
    sORF
    Upstream
BJ, Brain, HAP1,
HEK293, HeLa, hES,
LCL, Monocyte
411974 30

CAT ...

HGC ...

Ribo-seq
CAT

moderate

1 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
HCT116
413405 48

TTT ...

FTC ...

Ribo-seq
TTT

1 sORFs_org_Human
    sORF
    Upstream
HCT116
917308 39

TGC ...

CHW ...

Ribo-seq
TGC

moderate

1 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
Jurkat
3817 30

TTG ...

LLH ...

Ribo-seq
TTG

weak

22 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, MM1S,
Monocyte, RPE-1, THP-1
2936 162

CTG ...

LRD ...

Ribo-seq
CTG

12 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Brain, HAP1,
HEK293, hES, LCL,
MM1S, RPE-1, THP-1
3273 81

GTG ...

VGH ...

Ribo-seq
GTG

moderate

30 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1, U2OS
1833312 228

CTG ...

LFS ...

Ribo-seq
CTG

moderate

1 sORFs_org_Human
    Downstream
    sORF
HeLa
481823 156

GTG ...

VEQ ...

Ribo-seq
GTG

strong

18 sORFs_org_Human
    Alternative
    sORF
    Upstream
BJ, Blood, HAP1,
HEK293, HEK293T, HeLa,
hES, loayza_puch_2016, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
3093 72

ATG ...

MHL ...

Ribo-seq
ATG

moderate

28 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
3229 90

ATG ...

MLQ ...

Ribo-seq
ATG

26 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1
3235 93

GTG ...

VML ...

Ribo-seq
GTG

27 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1
1833827 69

ATG ...

MET ...

Ribo-seq
ATG

strong

2 sORFs_org_Human
Johnstone2016
    Alternative
    Downstream
    sORF
Brain_tumor, HEK293, HeLa,
HFF
79088 156

GTG ...

VSW ...

Ribo-seq
GTG

31 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, Jurkat, LCL,
loayza_puch_2016, MDA-MB-231, MM1S,
RPE-1, THP-1, U2OS
445048 81

TTT ...

FTC ...

Ribo-seq
TTT

1 sORFs_org_Human
    Alternative
    sORF
    Upstream
HCT116
2618262 162

AGT ...

SGA ...

Ribo-seq
AGT

2 sORFs_org_Human
    sORF
    Upstream
HeLa, THP-1
444769 114

GCC ...

ASS ...

Ribo-seq
GCC

1 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
HCT116
3302 69

GTG ...

VPC ...

Ribo-seq
GTG

31 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1, U2OS
536640 138

CTG ...

LDR ...

Ribo-seq
CTG

19 sORFs_org_Human
    sORF
    Upstream
BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HeLa,
hES, loayza_puch_2016, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
865706 162

CCG ...

PAR ...

Ribo-seq
CCG

1 sORFs_org_Human
    Alternative
    sORF
    Upstream
Jurkat
4097 48

ATG ...

MWP ...

Ribo-seq
ATG

moderate

24 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
HAP1, HEK293, HeLa,
hES, HFF, LCL,
MDA-MB-231, MM1S, Monocyte,
RPE-1, THP-1
3195496 66

CAC ...

HSK ...

Ribo-seq
CAC

1 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
HEK293
78864 189

CTG ...

LGA ...

Ribo-seq
CTG

21 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Brain, HAP1,
HEK293, HEK293T, HeLa,
hES, HFF, LCL,
MM1S, RPE-1, THP-1
917481 39

AGG ...

RHV ...

Ribo-seq
AGG

moderate

3 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
HeLa, Jurkat, THP-1
919873 42

TTC ...

FLK ...

Ribo-seq
TTC

moderate

1 sORFs_org_Human
    Alternative
    sORF
    Upstream
Jurkat
78790 102

CTG ...

LGT ...

Ribo-seq
CTG

26 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
3407930 UNKNOWN_TRANSCRIPT
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

78859 108

ATG ...

MTI ...

Predicted
ATG

1 Samandi2017
    sORF
3407935 497

ATG ...

MSE ...

Ribo-seq
ATG

1 Erhard2018

HFF
105732 33

ATG ...

MYW ...

Ribo-seq
ATG

1 Erhard2018
    sORF
HFF
3407938 323

ATG ...

MSE ...

Ribo-seq
ATG

1 Erhard2018

HFF
3407944 21

ATT ...

IKI ...

Ribo-seq
ATT

1 Erhard2018
    sORF
HFF
229878 120

ATG ...

MAW ...

Predicted
ATG

1 Samandi2017
    sORF
3407932 490

ATG ...

MSE ...

Ribo-seq
ATG

1 Erhard2018

HFF
3407929 1023

ATG ...

MSE ...

Ribo-seq
ATG

1 Erhard2018

HFF
78823 174

ATG ...

MLQ ...

Predicted
ATG

1 Samandi2017
    sORF
78807 165

ATG ...

MTT ...

Predicted
ATG

1 Samandi2017
    sORF
105683 33

GTG ...

VAL ...

Ribo-seq
GTG

1 Erhard2018
    sORF
HFF
79168 ENST00000610897 GNB1-209 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

230898 246

TTG ...

LVC ...

Ribo-seq
TTG

14 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Flp-In_T-REx-293, HAP1,
HEK293, HeLa, hES,
HFF, LCL, RPE-1,
THP-1
79167 225

ATG ...

MFL ...

Ribo-seq
ATG

20 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, RPE-1,
THP-1
79194 225

TTG ...

LNV ...

Ribo-seq
TTG

20 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, RPE-1, THP-1
79186 258

TTG ...

LLP ...

Ribo-seq
TTG

22 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, RPE-1,
THP-1
79190 264

CTG ...

LSL ...

Ribo-seq
CTG

20 sORFs_org_Human
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, RPE-1,
THP-1
79192 207

TTG ...

LLI ...

Ribo-seq
TTG

22 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, MM1S,
RPE-1, THP-1
79198 237

GTG ...

VDL ...

Ribo-seq
GTG

18 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Brain, Flp-In_T-REx-293,
HAP1, HEK293, HeLa,
hES, HFF, LCL,
RPE-1, THP-1
79196 231

CTG ...

LRL ...

Ribo-seq
CTG

20 sORFs_org_Human
    Alternative
    InCDS
    Overlapping
    sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, RPE-1, THP-1
1254140 ENST00000434686 GNB1-202 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

1254139 141

GTG ...

VEM ...

Ribo-seq
GTG

7 sORFs_org_Human
    sORF
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, RPE-1
1429117 96

CTG ...

LTS ...

Ribo-seq
CTG

3 sORFs_org_Human
    sORF
HeLa

ORFs

139 ORFs
3 known transcripts
134 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

994152 123

TTG...

LLL...

TTG Overlapping
sORF
Upstream
Brain, HEK293, hES
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
3 sORFs_org_Human
78859 108

ATG...

MTI...

ATG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Brain_tumor, Flp-In_T-REx-293, HAP1,
HEK293, HEK293T, HeLa,
hES, HFF, Jurkat,
LCL, loayza_puch_2016, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS,
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
32 sORFs_org_Human
Johnstone2016
3407930 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
917727 45

GCC...

ASR...

GCC InCDS
Overlapping
sORF
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 1 sORFs_org_Human
1833694 81

CTG...

LFC...

CTG Alternative
Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Human
231519 126

CTG...

LSA...

CTG Alternative
sORF
Upstream
BJ, Flp-In_T-REx-293, HAP1,
HEK293, HeLa, hES,
LCL, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
15 sORFs_org_Human
232135 81

GTG...

VGA...

GTG Alternative
sORF
Upstream
BJ, Blood, Flp-In_T-REx-293,
guo_2014, HAP1, HEK293,
HEK293T, HeLa, hES,
LCL, loayza_puch_2016, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
27 sORFs_org_Human
1833276 177

CTG...

LDL...

CTG Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
strong 1 sORFs_org_Human
174301 78

GTG...

VWA...

GTG Alternative
sORF
Upstream
BJ, Blood, Brain,
Breast, Flp-In_T-REx-293, guo_2014,
HAP1, HCT116, HEK293,
HEK293T, HeLa, hES,
HFF, Jurkat, LCL,
loayza_puch_2016, MDA-MB-231, MM1S,
Monocyte, RPE-1, THP-1,
U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
36 sORFs_org_Human
230898 246

TTG...

LVC...

TTG Alternative
InCDS
Overlapping
sORF
Brain, Flp-In_T-REx-293, HAP1,
HEK293, HeLa, hES,
HFF, LCL, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

79168 ENST00000610897 GNB1-209 protein_coding Ribo-seq
14 sORFs_org_Human
2611860 111

TGG...

WMT...

TGG InCDS
Overlapping
sORF
HeLa, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
2 sORFs_org_Human
1833318 63

GTG...

VAS...

GTG Alternative
Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
strong 1 sORFs_org_Human
79167 225

ATG...

MFL...

ATG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

79168 ENST00000610897 GNB1-209 protein_coding Ribo-seq
20 sORFs_org_Human
105732 33

ATG...

MYW...

ATG Alternative
sORF
Upstream
BJ, Blood, Brain,
Brain_tumor, Flp-In_T-REx-293, guo_2014,
HAP1, HEK293, HEK293T,
HeLa, hES, HFF,
LCL, loayza_puch_2016, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 32 sORFs_org_Human
Johnstone2016
3407930 UNKNOWN_TRANSCRIPT Ribo-seq
1 Erhard2018
2617647 51

CAG...

QGP...

CAG Alternative
Downstream
Overlapping
sORF
HeLa, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
2 sORFs_org_Human
3407935 497

ATG...

MSE...

ATG
HFF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3407930 UNKNOWN_TRANSCRIPT Ribo-seq
1 Erhard2018
920090 39

ATT...

IYM...

ATT Alternative
sORF
Upstream
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 1 sORFs_org_Human
78823 174

ATG...

MLQ...

ATG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Brain_tumor, Flp-In_T-REx-293, HAP1,
HEK293, HEK293T, HeLa,
hES, HFF, LCL,
MDA-MB-231, MM1S, Monocyte,
RPE-1, THP-1,
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
27 sORFs_org_Human
Johnstone2016
3407930 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
3981 36

GTG...

VAW...

GTG InCDS
Overlapping
sORF
Blood, Brain, Flp-In_T-REx-293,
HAP1, HEK293, HeLa,
hES, HFF, Jurkat,
LCL, MDA-MB-231, MM1S,
RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
strong 24 sORFs_org_Human
2985 30

TTG...

LTF...

TTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 28 sORFs_org_Human
917291 33

TGG...

WLR...

TGG Alternative
InCDS
Overlapping
sORF
HeLa, Jurkat, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 3 sORFs_org_Human
78831 207

CTG...

LTP...

CTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
27 sORFs_org_Human
78866 195

ATG...

MRL...

ATG InCDS
Overlapping
sORF
Brain, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MM1S,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
18 sORFs_org_Human
78805 138

CTG...

LSP...

CTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
26 sORFs_org_Human
78833 213

TTG...

LLL...

TTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
27 sORFs_org_Human
917569 108

TCG...

SSL...

TCG InCDS
Overlapping
sORF
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
78819 120

CTG...

LAT...

CTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
26 sORFs_org_Human
1833432 57

CTG...

LLC...

CTG Alternative
Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 1 sORFs_org_Human
174305 219

GTG...

VGS...

GTG Alternative
sORF
Upstream
BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HeLa,
hES, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
23 sORFs_org_Human
3241 102

CTG...

LVL...

CTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
27 sORFs_org_Human
636909 240

CTG...

LEA...

CTG Alternative
sORF
Upstream
BJ, hES, loayza_puch_2016,
MM1S, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 8 sORFs_org_Human
229878 120

ATG...

MAW...

ATG Alternative
Downstream
Overlapping
sORF
Brain, Brain_tumor, HEK293,
HeLa, hES, HFF,
LCL,
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
6 sORFs_org_Human
Johnstone2016
3407930 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
4138 66

ATG...

MPL...

ATG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Brain_tumor, Flp-In_T-REx-293, HAP1,
HEK293, HEK293T, HeLa,
hES, HFF, Jurkat,
LCL, MDA-MB-231, MM1S,
Monocyte, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 30 sORFs_org_Human
Johnstone2016
3091 66

TTG...

LPL...

TTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 28 sORFs_org_Human
413289 42

ACC...

TRF...

ACC Alternative
sORF
Upstream
HCT116
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
413332 72

AGT...

SYG...

AGT Alternative
sORF
Upstream
BJ, HCT116, HEK293,
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
5 sORFs_org_Human
105449 45

ATG...

MVN...

ATG sORF
Upstream
Brain, HAP1, HEK293,
hES, LCL
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
8 sORFs_org_Human
2549 75

CTG...

LTM...

CTG Alternative
Downstream
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
RPE-1, THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
25 sORFs_org_Human
536666 180

GTG...

VGS...

GTG sORF
Upstream
BJ, Blood, HAP1,
HEK293, HeLa, hES,
loayza_puch_2016, MDA-MB-231, MM1S,
RPE-1, THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
19 sORFs_org_Human
3407938 323

ATG...

MSE...

ATG
HFF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3407930 UNKNOWN_TRANSCRIPT Ribo-seq
1 Erhard2018
105697 39

TTG...

LKV...

TTG Alternative
sORF
Upstream
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, loayza_puch_2016, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 28 sORFs_org_Human
295423 39

GTG...

VWA...

GTG sORF
Upstream
BJ, Blood, Breast,
Flp-In_T-REx-293, guo_2014, HAP1,
HCT116, HEK293, HEK293T,
HeLa, hES, HFF,
Jurkat, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, Monocyte,
RPE-1, THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
34 sORFs_org_Human
863590 96

TCG...

SSP...

TCG InCDS
Overlapping
sORF
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
78829 186

CTG...

LVL...

CTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
26 sORFs_org_Human
3237 99

GTG...

VLV...

GTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
27 sORFs_org_Human
4303 63

CTG...

LGH...

CTG Alternative
Overlapping
sORF
Upstream
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 24 sORFs_org_Human
78825 177

GTG...

VML...

GTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
26 sORFs_org_Human
295067 33

TTG...

LET...

TTG Alternative
sORF
Upstream
BJ, Blood, Flp-In_T-REx-293,
guo_2014, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, Monocyte,
RPE-1, THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
strong 30 sORFs_org_Human
1520687 291

GTG...

VGF...

GTG Alternative
sORF
Upstream
BJ, MM1S
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 3 sORFs_org_Human
1833708 102

TTG...

LNF...

TTG Alternative
Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 1 sORFs_org_Human
229876 111

CTG...

LWR...

CTG Alternative
Downstream
Overlapping
sORF
Brain, HeLa, hES,
LCL
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
4 sORFs_org_Human
79090 78

ATG...

MVN...

ATG Overlapping
sORF
Upstream
BJ, Brain, Brain_tumor,
HAP1, HEK293, HEK293T,
HeLa, hES, HFF,
MDA-MB-231, RPE-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
13 sORFs_org_Human
Johnstone2016
1833418 30

CTG...

LLQ...

CTG Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Human
1833264 153

ATG...

MKP...

ATG Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 1 sORFs_org_Human
174303 177

CTG...

LDR...

CTG Alternative
sORF
Upstream
BJ, Blood, Brain,
Flp-In_T-REx-293, guo_2014, HAP1,
HEK293, HEK293T, HeLa,
hES, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
28 sORFs_org_Human
917079 93

CTG...

LQR...

CTG Alternative
InCDS
Overlapping
sORF
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
3057 60

CTG...

LAQ...

CTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 27 sORFs_org_Human
78821 153

ATG...

MCE...

ATG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
25 sORFs_org_Human
1833841 78

GTG...

VDA...

GTG Alternative
Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Human
3256 123

CTG...

LTP...

CTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
26 sORFs_org_Human
444765 90

ACT...

TST...

ACT Alternative
InCDS
Overlapping
sORF
HCT116
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
2511703 132

CTG...

LIG...

CTG Overlapping
sORF
Upstream
HEK293, hES
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
2 sORFs_org_Human
79194 225

TTG...

LNV...

TTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

79168 ENST00000610897 GNB1-209 protein_coding Ribo-seq
20 sORFs_org_Human
1833809 30

ATG...

MRA...

ATG Alternative
Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Human
2655 45

GTG...

VSW...

GTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 23 sORFs_org_Human
2634 36

CTG...

LGM...

CTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 24 sORFs_org_Human
917855 30

CTC...

LWR...

CTC Alternative
InCDS
Overlapping
sORF
HEK293, HeLa, Jurkat,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
4 sORFs_org_Human
105683 33

GTG...

VAL...

GTG Alternative
sORF
Upstream
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, loayza_puch_2016, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
strong 28 sORFs_org_Human
3407930 UNKNOWN_TRANSCRIPT Ribo-seq
1 Erhard2018
78857 84

CTG...

LET...

CTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
31 sORFs_org_Human
78827 183

GTG...

VLV...

GTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
26 sORFs_org_Human
2518 60

CTG...

LWR...

CTG Alternative
Downstream
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
21 sORFs_org_Human
1833241 81

TTG...

LYL...

TTG Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 1 sORFs_org_Human
1254139 141

GTG...

VEM...

GTG sORF
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, RPE-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1254140 ENST00000434686 GNB1-202 protein_coding Ribo-seq
7 sORFs_org_Human
4203 72

GTG...

VHM...

GTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 26 sORFs_org_Human
232142 108

CTG...

LPS...

CTG Alternative
sORF
Upstream
BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HEK293T,
HeLa, hES, LCL,
loayza_puch_2016, MDA-MB-231, MM1S,
RPE-1, THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
25 sORFs_org_Human
79186 258

TTG...

LLP...

TTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

79168 ENST00000610897 GNB1-209 protein_coding Ribo-seq
22 sORFs_org_Human
79094 117

TTG...

LSV...

TTG Overlapping
sORF
Upstream
Brain, HEK293, hES
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
4 sORFs_org_Human
3101 78

ATG...

MAM...

ATG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 27 sORFs_org_Human
3265 129

TTG...

LLL...

TTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
27 sORFs_org_Human
1833725 108

GTG...

VYL...

GTG Alternative
Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 1 sORFs_org_Human
3407944 21

ATT...

IKI...

ATT sORF
HFF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3407930 UNKNOWN_TRANSCRIPT Ribo-seq
1 Erhard2018
917512 72

GGG...

GMC...

GGG InCDS
Overlapping
sORF
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
3212 69

ATG...

MCE...

ATG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
24 sORFs_org_Human
78803 105

TTG...

LLG...

TTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
26 sORFs_org_Human
78807 165

ATG...

MTT...

ATG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Brain_tumor, Flp-In_T-REx-293, HAP1,
HEK293, HEK293T, HeLa,
hES, HFF, LCL,
MDA-MB-231, MM1S, RPE-1,
THP-1,
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
27 sORFs_org_Human
Johnstone2016
3407930 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
2601 30

ATG...

MTT...

ATG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 25 sORFs_org_Human
3222 54

CTG...

LGC...

CTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
strong 26 sORFs_org_Human
2528 69

ATG...

MAW...

ATG Alternative
Downstream
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
RPE-1, THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
25 sORFs_org_Human
294823 84

GTG...

VSL...

GTG Alternative
sORF
Upstream
HAP1, HEK293, HeLa,
hES, LCL, MDA-MB-231
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
8 sORFs_org_Human
917800 75

CAT...

HRD...

CAT Alternative
InCDS
Overlapping
sORF
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Human
79190 264

CTG...

LSL...

CTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

79168 ENST00000610897 GNB1-209 protein_coding Ribo-seq
20 sORFs_org_Human
1833295 201

CTG...

LCC...

CTG Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Human
919707 63

AGG...

RRP...

AGG Alternative
sORF
Upstream
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
79092 90

GTG...

VPR...

GTG Overlapping
sORF
Upstream
BJ, Brain, HAP1,
HEK293, HEK293T, HeLa,
hES, HFF, LCL,
MDA-MB-231, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
16 sORFs_org_Human
78772 69

ATG...

MHS...

ATG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
24 sORFs_org_Human
4263 51

CTG...

LCI...

CTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
RPE-1, THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 25 sORFs_org_Human
3407932 490

ATG...

MSE...

ATG
HFF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3407930 UNKNOWN_TRANSCRIPT Ribo-seq
1 Erhard2018
3407929 1023

ATG...

MSE...

ATG
HFF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3407930 UNKNOWN_TRANSCRIPT Ribo-seq
1 Erhard2018
413376 36

GTA...

VLE...

GTA Alternative
sORF
Upstream
BJ, HCT116, HEK293,
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 5 sORFs_org_Human
920348 123

CCG...

PAR...

CCG sORF
Upstream
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
79192 207

TTG...

LLI...

TTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, MM1S,
RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

79168 ENST00000610897 GNB1-209 protein_coding Ribo-seq
22 sORFs_org_Human
3187 33

GTG...

VPA...

GTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 27 sORFs_org_Human
916913 72

ACG...

TMA...

ACG Alternative
Downstream
Overlapping
sORF
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
918718 39

CCC...

PFW...

CCC Alternative
InCDS
Overlapping
sORF
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 1 sORFs_org_Human
920434 132

TGG...

WTE...

TGG Alternative
sORF
Upstream
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Human
1209338 78

TTG...

LTS...

TTG Alternative
sORF
Upstream
HAP1, HEK293, HeLa,
hES, HFF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
8 sORFs_org_Human
4113 57

CTG...

LGT...

CTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, MM1S,
Monocyte, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 25 sORFs_org_Human
231517 99

CTG...

LFV...

CTG Alternative
sORF
Upstream
BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HEK293T,
HeLa, hES, LCL,
MDA-MB-231, MM1S, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
22 sORFs_org_Human
1833305 42

CTG...

LQH...

CTG Alternative
Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 1 sORFs_org_Human
3185 36

CTG...

LAT...

CTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, Monocyte,
RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
24 sORFs_org_Human
229880 126

CTG...

LTM...

CTG Alternative
Downstream
Overlapping
sORF
BJ, Brain, Flp-In_T-REx-293,
HeLa, hES, HFF,
LCL
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
7 sORFs_org_Human
4455 57

GTG...

VPR...

GTG sORF
Upstream
BJ, Brain, HAP1,
HEK293, HeLa, hES,
LCL, Monocyte
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
14 sORFs_org_Human
411974 30

CAT...

HGC...

CAT Alternative
InCDS
Overlapping
sORF
HCT116
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Human
413405 48

TTT...

FTC...

TTT sORF
Upstream
HCT116
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
917308 39

TGC...

CHW...

TGC Alternative
InCDS
Overlapping
sORF
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Human
3817 30

TTG...

LLH...

TTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, MDA-MB-231, MM1S,
Monocyte, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
weak 22 sORFs_org_Human
2936 162

CTG...

LRD...

CTG Alternative
InCDS
Overlapping
sORF
BJ, Brain, HAP1,
HEK293, hES, LCL,
MM1S, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
12 sORFs_org_Human
3273 81

GTG...

VGH...

GTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 30 sORFs_org_Human
1833312 228

CTG...

LFS...

CTG Downstream
sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Human
481823 156

GTG...

VEQ...

GTG Alternative
sORF
Upstream
BJ, Blood, HAP1,
HEK293, HEK293T, HeLa,
hES, loayza_puch_2016, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
strong 18 sORFs_org_Human
3093 72

ATG...

MHL...

ATG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, Monocyte, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 28 sORFs_org_Human
3229 90

ATG...

MLQ...

ATG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
26 sORFs_org_Human
3235 93

GTG...

VML...

GTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
27 sORFs_org_Human
79198 237

GTG...

VDL...

GTG Alternative
InCDS
Overlapping
sORF
BJ, Brain, Flp-In_T-REx-293,
HAP1, HEK293, HeLa,
hES, HFF, LCL,
RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

79168 ENST00000610897 GNB1-209 protein_coding Ribo-seq
18 sORFs_org_Human
1833827 69

ATG...

MET...

ATG Alternative
Downstream
sORF
Brain_tumor, HEK293, HeLa,
HFF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
strong 2 sORFs_org_Human
Johnstone2016
79088 156

GTG...

VSW...

GTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, Jurkat, LCL,
loayza_puch_2016, MDA-MB-231, MM1S,
RPE-1, THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
31 sORFs_org_Human
445048 81

TTT...

FTC...

TTT Alternative
sORF
Upstream
HCT116
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
2618262 162

AGT...

SGA...

AGT sORF
Upstream
HeLa, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
2 sORFs_org_Human
444769 114

GCC...

ASS...

GCC Alternative
InCDS
Overlapping
sORF
HCT116
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
3302 69

GTG...

VPC...

GTG InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1, U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
31 sORFs_org_Human
1429117 96

CTG...

LTS...

CTG sORF
HeLa
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1254140 ENST00000434686 GNB1-202 protein_coding Ribo-seq
3 sORFs_org_Human
536640 138

CTG...

LDR...

CTG sORF
Upstream
BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HeLa,
hES, loayza_puch_2016, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
19 sORFs_org_Human
865706 162

CCG...

PAR...

CCG Alternative
sORF
Upstream
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
4097 48

ATG...

MWP...

ATG InCDS
Overlapping
sORF
BJ, Blood, Brain,
HAP1, HEK293, HeLa,
hES, HFF, LCL,
MDA-MB-231, MM1S, Monocyte,
RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 24 sORFs_org_Human
3195496 66

CAC...

HSK...

CAC Alternative
InCDS
Overlapping
sORF
HEK293
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
1 sORFs_org_Human
78864 189

CTG...

LGA...

CTG InCDS
Overlapping
sORF
BJ, Brain, HAP1,
HEK293, HEK293T, HeLa,
hES, HFF, LCL,
MM1S, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
21 sORFs_org_Human
79196 231

CTG...

LRL...

CTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, HFF,
LCL, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

79168 ENST00000610897 GNB1-209 protein_coding Ribo-seq
20 sORFs_org_Human
917481 39

AGG...

RHV...

AGG Alternative
InCDS
Overlapping
sORF
HeLa, Jurkat, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 3 sORFs_org_Human
919873 42

TTC...

FLK...

TTC Alternative
sORF
Upstream
Jurkat
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Human
78790 102

CTG...

LGT...

CTG Alternative
InCDS
Overlapping
sORF
BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, MDA-MB-231,
MM1S, RPE-1, THP-1
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

2519 ENST00000615252 GNB1-210 protein_coding Ribo-seq
26 sORFs_org_Human

Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS